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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.7G203500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
NF-YA |
Protein Properties |
Length: 349aa MW: 38884.7 Da PI: 8.602 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.7G203500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 103.5 | 1.9e-32 | 191 | 247 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
d p+YVNaKQy++Il+RRq+Rakle+++kl k+rkpylheSRh hAl+R RgsgGrF
Prupe.7G203500.1.p 191 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-LKARKPYLHESRHLHALNRVRGSGGRF 247
57****************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0016602 | Cellular Component | CCAAT-binding factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MANVIEWLHT RRLHDSLIEL SMPTQNLDKK FFSQSSVQSM PLYTTNCMSW NPIEREIPQS 60 SSKDASFKVE FTPQVHHDAK HLGLQLLPDQ GSSSTTQTIS QSQDRCNSSE SGEDEICGKG 120 VEGQMKPVYL LNNLDLMSNP SQVGYGNLMG RVPYPYADPY FSGFLAAYGP QAMPQMMAPT 180 RVPLPLDLAE DGPIYVNAKQ YHGILRRRQS RAKLEAQNKL LKARKPYLHE SRHLHALNRV 240 RGSGGRFLST KRLQQSDQNP SSSTHDVPDS INLHQKDTQD TESHHLGSSE FVTAVATHSD 300 IASVSHTNDI FRQQDRRFSG IPSHMGGAMQ FRGGLMRAGT QHCASVVR*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:11250072, ECO:0000269|PubMed:9662544}. |
Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |