PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G191100.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 500aa    MW: 54372.6 Da    PI: 4.7923
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G191100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-11284329555
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h+++Er RR++i +++ +L+el+P++      + +Ka++L + +eY+k Lq
  Prupe.7G191100.1.p 284 HSIAERLRREKIAERMKNLQELVPNS-----NRTDKASMLDEIIEYVKFLQ 329
                         99***********************7.....59*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.4E-16277339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.77E-12277333No hitNo description
PROSITE profilePS5088816.901279328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-15281338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-8284329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-12285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MDNYLNQFFS SSSWSDVDVK ERSSWGCCES GQPNEMLLNS AGVDEDDNNS SPTYLTNSNH  60
SMESLAAQDA SSIVHDLESD AQDDGKNFKP NLSNGKVDGS FKVENPGLQY DVDIVTPCSL  120
ASLEQLPLNG NMVRTSLSTI EPENVVCNNR EPSIFERFNG DFETLPSISQ LWPLQSYEGV  180
PSSLSPGMGQ HRMCSFGLKG EYGDNGTYAM ANDPNNLAVL VTTEGKQDLQ NYPLPSFASG  240
PQITMTMSGL QSLQQATSTT PSAECTGTGK PRMRARRGQA TDPHSIAERL RREKIAERMK  300
NLQELVPNSN RTDKASMLDE IIEYVKFLQL QIKVLSMSRV GAAGAVVPLI TDTQQAKGAN  360
GSSLLPSVGQ VTDISFNEIA LEQVVRLMES DVTKAMQHLQ SKGLCLMPIA LADAISTEKK  420
SSSSPAPASD DWKKTGFNDS GLVQNNSSSS SNSSLPEKSN SVGLSVIFQH THMANTDHLN  480
QKGMHQRRFI LHSWLGFDL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G191100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020423474.10.0transcription factor bHLH112
RefseqXP_020423475.10.0transcription factor bHLH112
RefseqXP_020423476.10.0transcription factor bHLH112
RefseqXP_020423477.10.0transcription factor bHLH112
TrEMBLA0A251NFN60.0A0A251NFN6_PRUPE; Uncharacterized protein
STRINGXP_008242151.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF150611314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58010.12e-57LJRHL1-like 3