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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.7G167700.1.p |
| Common Name | PRUPE_ppa025093mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
WOX |
| Protein Properties |
Length: 305aa MW: 33793.8 Da PI: 7.0233 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G167700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.6 | 6.1e-20 | 31 | 92 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+t+t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++
Prupe.7G167700.1.p 31 STRWTPTSDQIRILKDLYYNngVRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 92
58*****************8678*************************************97 PP
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| 2 | Wus_type_Homeobox | 113.5 | 1.1e-36 | 30 | 94 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
Prupe.7G167700.1.p 30 SSTRWTPTSDQIRILKDLYYnNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 94
789***************9779*****************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MEPQQTQQQP NEDGSNKGTS SGTNFLCRQS STRWTPTSDQ IRILKDLYYN NGVRSPSAEQ 60
IQRISARLRQ YGKIEGKNVF YWFQNHKARE RQKKRFIDVP APPIMQRSGL GINNNNAPTA 120
YEPINHSNKY PNSSASAGVS PSSAGVIAVG QMGSHGYGSM TMEKSFRDCS ISAAGGTSSG 180
HVGGSNNNIG HNFGSWVGVD AYSSPYTLFD KRSSSRQVFG DQENTMDEED HEYQENLQGS 240
PEIETLPLFP MHGEDIHGFG NIKSTSDGYY SGWYRSDDGN NGRTSLELSL NSYGHMTRDY 300
FRSY*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In the active shoot meristem, it is specifically expressed in a small cell group underneath the presume position of stem cells. {ECO:0000269|PubMed:12208843}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). Acts in parallel with HAM. {ECO:0000269|PubMed:12208843}. |
