PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G161500.1.p
Common NamePRUPE_ppa018832mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 668aa    MW: 77264.5 Da    PI: 7.4947
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G161500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.41.6e-2042125490
                FAR1   4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                         n+YA + GFs+rk + ++  +n+ + +r++ Cskeg++++e+   e ++ +r  trtgCka ++ + + +g w++++++l+HnHe+a
  Prupe.7G161500.1.p  42 NTYAFRKGFSIRKGNIRRDAQNK-VRQRDYFCSKEGFQSDEDLC-EVKKVRRLDTRTGCKALIRFTAD-NGIWKISHINLDHNHEFA 125
                         89**************9996666.*****************999.899999***************99.***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.5E-1842125IPR004330FAR1 DNA binding domain
PfamPF105512.2E-30247341IPR018289MULE transposase domain
PROSITE profilePS5096610.249526562IPR007527Zinc finger, SWIM-type
PfamPF044344.1E-5535561IPR007527Zinc finger, SWIM-type
SMARTSM005751.0E-5537564IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    Send to blast
MDYTCQGKIL EISDKEEIFD AIDELKVGME VSNEAEAYNL CNTYAFRKGF SIRKGNIRRD  60
AQNKVRQRDY FCSKEGFQSD EDLCEVKKVR RLDTRTGCKA LIRFTADNGI WKISHINLDH  120
NHEFAKPEER QFLRSGRHIP RVRAGMLGPK VDESTRPTKS YSYLGKKFGN AENVGSTNKD  180
CLNYLQRNKE EMLEGGDGQS LINYFKHKQM EDPSFFYSVQ VDQFNRITNY FWRDGRSKLD  240
YDCFGDVVCF DTTFRTKKYN LICAPFVGVN HHCKNVLFGC AFVSDESTDS FIWLFETFLE  300
SMGYKQPKTI FTDVGNAMAN AIVVMLRETR HRLCIWHISK NATQYIGSHY SNHEFKEHFN  360
KCFHDCLTEA EFEATWNDLI RKFNLESNSW LQELYSLREK WCPAFSLDTF TANIRSSNRG  420
ESITSTFHQI STKTMDLIGL VQHYEKKTKV VRSAELEEDF RCKNGMPHLR ANSGIFKHAA  480
SEYTIKMYSF FENELMSIFG VRMIEVGNDG NQYIYEAIEE GHPRVYIIEY NSATSMVSCS  540
CKLFESIGLL CRHALKVLDL KNFTSIPTRY IEKRWTKGAK KRIVESSHLY ESSYKMGKSA  600
QSLRLSELMH EGNNVFSIGS LCDSGTRIVK QKLVEAMKLL ESDEETTSLQ GNLNKVDDQF  660
VRDVLDN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G161500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425024.10.0protein FAR1-RELATED SEQUENCE 5
RefseqXP_020425025.10.0protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A251NC830.0A0A251NC83_PRUPE; Uncharacterized protein
STRINGXP_008241738.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF4030530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-113FAR1-related sequence 5