 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.7G155700.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
ZF-HD |
Protein Properties |
Length: 357aa MW: 39471.7 Da PI: 10.0277 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.7G155700.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 101.8 | 4.5e-32 | 120 | 176 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
+kvrY+eCl+NhAas Ggh++DGCgEfmps gee ++alkCaAC+CHRnFHR+e e
Prupe.7G155700.1.p 120 QKVRYRECLRNHAASSGGHVLDGCGEFMPS-GEEDIPEALKCAACECHRNFHRKEIEG 176
689**************************9.88889******************9875 PP
|
2 | Homeobox | 14 | 8.6e-05 | 268 | 328 | 1 | 57 |
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
+r Rt+f++eq e + e+ e k + +++e ++L +++g++ ++ kvW +N ++ +kk
Prupe.7G155700.1.p 268 KRFRTKFSQEQKEKMMEVAEklgwKIQRHDEQEVQKLCSEVGIKRQVFKVWMHNNKQAMKK 328
789*************99996666688899***************************9997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MEVRGQDKVI GMPTTLGYNP PNRDSSSSKL SSSPALPSTA NNIIFINPLQ TLDPHPSPHR 60 HQPHQLNLSP HKSSRRDSEQ NPDPISSPIV VTPSATTTTA TSIPGGSNFK APPAQPPPPQ 120 KVRYRECLRN HAASSGGHVL DGCGEFMPSG EEDIPEALKC AACECHRNFH RKEIEGDHLP 180 NNYYVVNHQK HTISRRDSET RVFQLPPPPL PPVHHSAAGG PVPQTMMAFG GRGGGGGGAD 240 ESSSEDLNMN NLFRATYAAG QQAAGSKKRF RTKFSQEQKE KMMEVAEKLG WKIQRHDEQE 300 VQKLCSEVGI KRQVFKVWMH NNKQAMKKKQ MVKDVKGRKR KAKEEMRCQL FCRGVM*
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 229 | 237 | GGRGGGGGG |
2 | 326 | 340 | KKKQMVKDVKGRKRK |
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves, stems, flowers and inflorescence. {ECO:0000269|PubMed:16428600}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Putative transcription factor. |