PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G120600.1.p
Common NamePRUPE_ppa004154mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 528aa    MW: 57098.9 Da    PI: 6.8721
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G120600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.91.3e-18147233186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         +W+++ + +L++a++++ ++l+rg+l++ +Weev++ +  r    ++s  qCk+k +nl+kryk ++++++++   s s++p+f+++e
  Prupe.7G120600.1.p 147 EWSDSAISCLLDAYTDKFTQLNRGNLRGRDWEEVAAIVseRCDRQRKSVDQCKNKVDNLKKRYKLERQRMNNG-GVSASHWPWFKKME 233
                         5*************************************544456677**********************9998.566679*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.3E-21145235No hitNo description
Gene3DG3DSA:3.40.1160.109.9E-73277520IPR001048Aspartate/glutamate/uridylate kinase
HamapMF_01220_B33.931286521IPR015963Uridylate kinase, bacteria
SuperFamilySSF536337.46E-58287520IPR001048Aspartate/glutamate/uridylate kinase
CDDcd042543.57E-124289521No hitNo description
PfamPF006963.5E-25290500IPR001048Aspartate/glutamate/uridylate kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006221Biological Processpyrimidine nucleotide biosynthetic process
GO:0046939Biological Processnucleotide phosphorylation
GO:0005737Cellular Componentcytoplasm
GO:0033862Molecular FunctionUMP kinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MASCDDDFSI LGDESNTTHH SHLPHAPSSH QLHQPYAPPH RFATRTTPVH APPAQPILSD  60
KVNAVEDQAE AGDDYDDASA AAFCSNPFES GTDQNDVVAG ASEKRKEHSD ELSDGGGGGS  120
GSAPYSYKRS KPSSTAAIGE YRKDREEWSD SAISCLLDAY TDKFTQLNRG NLRGRDWEEV  180
AAIVSERCDR QRKSVDQCKN KVDNLKKRYK LERQRMNNGG VSASHWPWFK KMENIVGNSL  240
PGKAISDEDK GVSSPGTTPR QSKSRNAMAI ISPVSQMNKV KSAPSIKWRR VVFKISGAAL  300
AGAAPNNVDS KLAMLIAREV ALACHNGVEV AIVVGGRNFF CGDAWVTATG LDRSTAYQIG  360
MMATVMNSVL LQSALEKMGV QTRVQTAFSM QEVAEPYSRQ RAIRHLEKGR VVIFAGIGAG  420
TGNPLFSTDT AAALRALEIH AEAVLKGTNV DGVYDCNSQD NNFTFEHISF RDVVTRGATS  480
MDSMALTFCE ENRIPVVVFN LLEPGNISKA LCGEQVGTLI DQAGRIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ek5_A1e-612865207239Uridylate kinase
3ek5_B1e-612865207239Uridylate kinase
3ek5_C1e-612865207239Uridylate kinase
3ek5_D1e-612865207239Uridylate kinase
3ek5_E1e-612865207239Uridylate kinase
3ek5_F1e-612865207239Uridylate kinase
3ek6_A1e-612865207239Uridylate kinase
3ek6_B1e-612865207239Uridylate kinase
3ek6_C1e-612865207239Uridylate kinase
3ek6_D1e-612865207239Uridylate kinase
3ek6_E1e-612865207239Uridylate kinase
3ek6_F1e-612865207239Uridylate kinase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00340DAPTransfer from AT3G10030Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G120600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020423621.10.0uncharacterized protein LOC18771263 isoform X1
TrEMBLA0A251NAG30.0A0A251NAG3_PRUPE; Uncharacterized protein
STRINGXP_008241324.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40623252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.10.0Trihelix family protein