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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.7G102000.1.p |
| Common Name | PRUPE_ppa025103mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 286aa MW: 32123.7 Da PI: 7.3013 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G102000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 133.4 | 1.5e-41 | 4 | 139 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyW 83
lppGfrF Pt+eelv++yL+kk+eg++ +++vi+ + iy+++P+dLp+ +++++ ++w+fF++r++++a+g r++r t++gyW
Prupe.7G102000.1.p 4 LPPGFRFYPTEEELVSFYLQKKLEGRRedlnRVMDRVIPVLYIYEYNPSDLPQfsgeACHGDPEQWFFFIPRQESEARGGRPRRLTTTGYW 94
79*************************665433344799999**********656655555777*************************** PP
NAM 84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
katg+ v+s+ +++++glk+t+vfy+grap+g+kt+W m+ey+
Prupe.7G102000.1.p 95 KATGSPSFVYSSnSNRAIGLKRTMVFYNGRAPHGRKTEWKMNEYK 139
**********9866778***************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MEDLPPGFRF YPTEEELVSF YLQKKLEGRR EDLNRVMDRV IPVLYIYEYN PSDLPQFSGE 60
ACHGDPEQWF FFIPRQESEA RGGRPRRLTT TGYWKATGSP SFVYSSNSNR AIGLKRTMVF 120
YNGRAPHGRK TEWKMNEYKA IEAHHADQNQ PLIASSSSNT PSAPTLRQEF SLCRVYKKSK 180
CLRAFDRRPL GAEIMSNPSL NLNQTAAAHE GAGHQGQGSA SHSRNPLMGS DQRTNSSSPE 240
SSSSGDHHGP QPPSQPAGET GTLPMFIDNE ALWDLEQLMI NNNWL*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-31 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-31 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-31 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-31 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-31 | 4 | 178 | 17 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 1e-31 | 4 | 178 | 17 | 165 | NAC domain-containing protein 19 |
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