PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G094300.1.p
Common NamePRUPE_ppa002158mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 708aa    MW: 77364.9 Da    PI: 7.3363
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G094300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.21.6e-094004371954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  Prupe.7G094300.1.p 400 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 437
                         554459******************************88 PP
2BELL121.43.8e-39264335172
                BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         erqe+q+kk kL+s+l+eVd+rY+qy+ q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi
  Prupe.7G094300.1.p 264 ERQEIQMKKGKLISMLDEVDQRYRQYHRQMQVVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITNQI 335
                         79*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.7E-65190333IPR006563POX domain
PfamPF075261.7E-49195332IPR006563POX domain
PROSITE profilePS5007112.195378441IPR001356Homeobox domain
CDDcd000863.84E-12381442No hitNo description
SMARTSM003895.3E-9381445IPR001356Homeobox domain
SuperFamilySSF466898.55E-17382447IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-28384447IPR009057Homeodomain-like
PfamPF059202.9E-18398437IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009610Biological Processresponse to symbiotic fungus
GO:0009737Biological Processresponse to abscisic acid
GO:0010197Biological Processpolar nucleus fusion
GO:0010201Biological Processresponse to continuous far red light stimulus by the high-irradiance response system
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 708 aa     Download sequence    Send to blast
MATYFHHGNS SEIQASSDGA LQTLVLMNPG YVQYSDTPPP PPHPQPHQPP SAGNLVFLNS  60
PTNSLPHHPS TLSHAPPSHP QQFVGIPLSH DPNNNNSPSM HQAHPDLSSL HAFMPRIQTQ  120
YALWNSIDPN TAARDTPRAQ QGLSLTLSSQ QPGFGSFRGA TSDREVPSGE DIRVSSGSNS  180
SASGVTNGVS GMQSVLLSSK YLKAAQELLE EVVNVGNGIR TELPKKGSGQ QSKVVAESSM  240
AAAGDSSVGG EGSGKRAAEL STAERQEIQM KKGKLISMLD EVDQRYRQYH RQMQVVISSF  300
EQAAGIGSAR TYTALALQTI SKQFRCLKDA ITNQIRAANK SLGEEDCAAG KIEGSRLKYV  360
DHQLRQQRAL QQLGMIQHNA WRPQRGLPER SVSVLRAWLF EHFLHPYPKD SDKHMLAKQT  420
GLTRSQVSNW FINARVRLWK PMVEEMYLEE VKEHEQNGSS EKMSKSNEDS ASKSTAPQDT  480
ENNQTTSTFN SKQENSTNHN NIAAPPSMSI STPSTSPTNM VRNPSGFSLI GSSELDGITQ  540
GSPKKPRSTE FMQSPNSSVP CMNMDHKAQE VNNEQLSMKF GDERQGRDGY SFMGGQTNFI  600
GSFGQYPIGE IGRFDADQFT PRFSGNGVSL TLGLPHCENL SLSGAHHHQN FLPNQNIQLG  660
RRVDIGEAND QFGTINTSAP HSSAAFENID IQNRKRFVAQ LLPDFVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-16387445563Homeobox protein Meis2
3k2a_B6e-16387445563Homeobox protein Meis2
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.23310.0fruit| leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G094300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204251.10.0BEL1-like homeodomain protein 1
RefseqXP_020423343.10.0BEL1-like homeodomain protein 1
SwissprotQ9SJ560.0BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBLM5WF990.0M5WF99_PRUPE; Uncharacterized protein
STRINGEMJ054490.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-169BEL1-like homeodomain 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]