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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G092400.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 27146.1 Da PI: 7.7752 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.9 | 8.3e-49 | 6 | 133 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrF+Ptd elv++yLk+kv gk+l++ ++i+evdi+k+ PwdLp k++ +++ +wyfF+++++ky+tg r +ra + gyWkatgkd+ Prupe.7G092400.3.p 6 LPPGFRFSPTDVELVQYYLKRKVMGKRLHF-NFIAEVDIHKYAPWDLPeKSCWQGDLKWYFFCPTSRKYPTGARVKRANECGYWKATGKDR 95 79**************************99.99***************656666788********************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +vl +ge+ g ktL+f++grapkge+tdWvmheyrle Prupe.7G092400.3.p 96 SVLY-NGEVSGWIKTLIFHRGRAPKGERTDWVMHEYRLE 133 ****.999*****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-57 | 4 | 155 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.093 | 6 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.9E-25 | 7 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
MRKSPLPPGF RFSPTDVELV QYYLKRKVMG KRLHFNFIAE VDIHKYAPWD LPEKSCWQGD 60 LKWYFFCPTS RKYPTGARVK RANECGYWKA TGKDRSVLYN GEVSGWIKTL IFHRGRAPKG 120 ERTDWVMHEY RLEAKNLADS DVLQDSYVIC MIFQKDGPGP RNGAEYGAPF KEEDWTDDEA 180 EICSEAVPHA NMPEPNLVVP SNYNSSIITS THSPEVIMLQ WRSLMFPMMI FCQC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-46 | 6 | 155 | 15 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.20238 | 1e-149 | fruit |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in the epidermal cells of the root apical region. {ECO:0000269|PubMed:20388856}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G092400.3.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020426054.1 | 1e-136 | NAC domain-containing protein 82 | ||||
Swissprot | Q9FY82 | 3e-85 | NAC82_ARATH; NAC domain-containing protein 82 | ||||
TrEMBL | A0A251N940 | 1e-177 | A0A251N940_PRUPE; Uncharacterized protein | ||||
STRING | EMJ05887 | 1e-162 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 2e-88 | NAC domain containing protein 103 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G092400.3.p |
Publications ? help Back to Top | |||
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