 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.7G079300.1.p |
| Common Name | PRUPE_ppa008075mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 347aa MW: 38204.8 Da PI: 8.6066 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G079300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55.6 | 9e-18 | 184 | 238 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++k+q Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
Prupe.7G079300.1.p 184 RKKLRLSKDQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 238
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 127.1 | 7.4e-41 | 184 | 274 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rlsk+q+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eLr +l
Prupe.7G079300.1.p 184 RKKLRLSKDQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKELQELR-AL 273
69*************************************************************************************9.55 PP
HD-ZIP_I/II 92 k 92
k
Prupe.7G079300.1.p 274 K 274
5 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MELALSLGDA SKPFLFLDKA PKMGSKDLGF CMGLGGAFSA RSDESRESIH EGDHDQDERR 60
RRRVSSDPPV QLNLLPSAPV PRSHASSQLR FPWLTDNLAV SEPAGSSDGP GRGLDVNRMP 120
GMVAAAEEAE DAAAPLSSPN STVSSFQMDF GVGNGGRSSK RDLELETDRA SSRASDDEDN 180
GSTRKKLRLS KDQSAFLEES FKEHSTLNPK QKLALAKQLN LRPRQVEVWF QNRRARTKLK 240
QTEVDCEYLK RCCETLTDEN RRLQKELQEL RALKTSQPFY MQLPATTLTM CPSCERVVTT 300
AAANTTNNNN NNSLKSALTK PRLHHPFAQA QVHMQHQVQA SKGAAA*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 182 | 188 | TRKKLRL |
| 2 | 232 | 240 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
