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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.7G065000.1.p |
| Common Name | PRUPE_ppa026190mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 429aa MW: 49202.8 Da PI: 6.3221 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G065000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 133.1 | 2e-41 | 32 | 159 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lp G+rF Ptd elv+ yL+ kv +k+++ + + ++di ++P+dL + + +e+ewyfF++r++ky++g+r+ r++ +g+Wkatgk +
Prupe.7G065000.1.p 32 LPCGYRFAPTDAELVSSYLEGKVLNKEIPK-NRFLDLDISLYHPRDLTgRITLIRESEWYFFTSRKRKYPKGQRPDRSAVDGFWKATGKAQ 121
699*************************99.67999***********9444445889********************99************ PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++ +++g+++g k+tL fy+g++++g++t+W mhey+l
Prupe.7G065000.1.p 122 DIEDSNGKVIGSKRTLDFYQGNHQDGKRTEWKMHEYTL 159
************************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MGENNRFIND PIPEQVDLFI NDPTNDAYFN SLPCGYRFAP TDAELVSSYL EGKVLNKEIP 60
KNRFLDLDIS LYHPRDLTGR ITLIRESEWY FFTSRKRKYP KGQRPDRSAV DGFWKATGKA 120
QDIEDSNGKV IGSKRTLDFY QGNHQDGKRT EWKMHEYTLD APPNEISNTR VTQLDNCVLC 180
KIYKNNKGGN NDSSTTQSDQ RAEPSTNVVA SQAFPDQQIQ PVHQHDQYLV SQSSGASSSS 240
TANKRPRGRP TPTILNTYVG NPTYYPHQQY PFQNQTSGNP PGPVHNNYQN LTQYNQNDQN 300
LTQYDQNDQN LTQYAQNDQN LTQYDQNDQN LTQYDTQSAN IESHVQPRES FSSQPGFLPH 360
METSTYADQM PLVDSSSMQL PVHVRLYEQL LAARNKDGDF DKRLEHWYHH QQQLFRQNPS 420
STPNCKLV*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-32 | 31 | 185 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-32 | 31 | 185 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-32 | 31 | 185 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-32 | 31 | 185 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-31 | 31 | 185 | 19 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 8e-32 | 31 | 185 | 16 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 8e-32 | 31 | 185 | 16 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FM253564 | 0.0 | FM253564.1 Prunus cerasifera BAC insert containing Ma gene, ma1 susceptible allele, clone 40K9. |
