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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.7G064900.1.p |
| Common Name | PRUPE_ppa018568mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 327aa MW: 37287.9 Da PI: 6.078 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G064900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 139.8 | 1.7e-43 | 26 | 153 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd 89
lp G+rF Pt+eelv eyLkkk++++ l++ + ++evd+yk++P++L ++ +e+ewyfFs+r++ky++g+r+nr a ++gyWkatg+d
Prupe.7G064900.1.p 26 LPSGYRFVPTNEELVEEYLKKKIKNELLPI-NRFREVDVYKYHPEELTgMHNLLRENEWYFFSSRERKYPNGSRPNRaADNHGYWKATGTD 115
699***************************.77**************8433334899********************66779********* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++++ ++e++g k++L fy g++ +g+kt+W mhey l
Prupe.7G064900.1.p 116 DKIKV-NNEVIGQKRILDFYAGKHGEGVKTEWKMHEYVL 153
*****.999****************************87 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MEESNIQVSH EIFDEAWLTD KYINDLPSGY RFVPTNEELV EEYLKKKIKN ELLPINRFRE 60
VDVYKYHPEE LTGMHNLLRE NEWYFFSSRE RKYPNGSRPN RAADNHGYWK ATGTDDKIKV 120
NNEVIGQKRI LDFYAGKHGE GVKTEWKMHE YVLSGNIAPS NGHKANGDMK LNDCVLCKIY 180
KNKRVKKNKN KGIADSVQSA HQHDHQEYPS PLIANSNSSS SSINHHYTAA GMSSTTVNTE 240
FGEPPYYNES FQNGAWSNYP WPITSFNNHR TLDSAYTSHG LPMNTFSSPF STDLEPANDT 300
ALADPSTSSQ IPHDHAEEDD NNSFDI*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-43 | 26 | 183 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-43 | 26 | 183 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-43 | 26 | 183 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-43 | 26 | 183 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-43 | 26 | 183 | 20 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-43 | 26 | 183 | 17 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-43 | 26 | 183 | 17 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FM253563 | 0.0 | FM253563.1 Prunus cerasifera BAC insert containing Ma gene, resistant Ma1 allele, clone 76H19. |
| GenBank | FM253564 | 0.0 | FM253564.1 Prunus cerasifera BAC insert containing Ma gene, ma1 susceptible allele, clone 40K9. |
