PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G063400.1.p
Common NamePRUPE_ppa009445mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 293aa    MW: 31983.3 Da    PI: 8.4173
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G063400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00075226248223
                         EETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                         +Cp Cg  Fs+   L+ H  + H
  Prupe.7G063400.1.p 226 ECPQCGAKFSSVTALVDHVEKvH 248
                         5*****************99888 PP
2zf-C2H215.83.9e-05265286323
                         ETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                         Cp+C+k F+++  L+ H  + H
  Prupe.7G063400.1.p 265 CPKCSKGFRDPVALVEHVERdH 286
                         *****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183101.86E-12652No hitNo description
PROSITE profilePS510397.6991056IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.1E-101154IPR000058Zinc finger, AN1-type
PfamPF014281.1E-131351IPR000058Zinc finger, AN1-type
SMARTSM001544.5E-51352IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.103.1E-1191148IPR000058Zinc finger, AN1-type
SuperFamilySSF1183102.22E-893142No hitNo description
PROSITE profilePS510397.96498146IPR000058Zinc finger, AN1-type
SMARTSM0035529099129IPR015880Zinc finger, C2H2-like
PfamPF014281.7E-8101141IPR000058Zinc finger, AN1-type
SMARTSM001540.013101142IPR000058Zinc finger, AN1-type
SMARTSM003550.023225248IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.286225248IPR007087Zinc finger, C2H2
PfamPF138943.3E-4226248No hitNo description
PROSITE patternPS000280227248IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.7E-4229248IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS501578.829263291IPR007087Zinc finger, C2H2
SMARTSM003557.1263286IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280265286IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MGTPEFPDLG RHCYIADCQQ IDFLPFTCDS CHQVFCLEHR SYIKHNCPKA DKQNVTVVIC  60
PLCAKGVHLI PDEDANITWE RHVNTECDPS NYEKATKKKK CPVPGCKELL TFSNTIKCRD  120
CMVNHCLKHR FGPDHKCPGP KKPTTGFPFS GLLSRSRKEV SKPNHAPAAS SSNWSNSFLT  180
AASSFRASAE ASVAKLSSEL SQKWQIAKDG VGQSSNSGSR NGQLEECPQC GAKFSSVTAL  240
VDHVEKVHEK GGNRAGVKKA TIDACPKCSK GFRDPVALVE HVERDHGGTS RT*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.200830.0fruit
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G063400.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, dehydration and salt stress. {ECO:0000269|PubMed:17033811}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202398.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423962.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423963.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423964.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423965.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423966.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
SwissprotQ0D5B91e-125SAP16_ORYSJ; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
TrEMBLM5VQL80.0M5VQL8_PRUPE; Uncharacterized protein
STRINGEMJ035970.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-117C2H2 family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]