PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G040100.2.p | ||||||||
Common Name | PRUPE_ppa018670mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 28161.8 Da PI: 7.706 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.1 | 1.6e-13 | 74 | 125 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN ++ Lr+llP + + kKls + ++v+Y+ +Lq Prupe.7G040100.2.p 74 KKLNHNASERDRRQKINRLYSSLRSLLPAD---QMKKLSIPNTISRVVKYVPELQ 125 6789**************************...9*****************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 7.2E-14 | 68 | 138 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.681 | 73 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.87E-10 | 74 | 129 | No hit | No description |
Pfam | PF00010 | 9.7E-11 | 74 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.8E-11 | 74 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-7 | 79 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MLALSPPSFS TTGWPLEDSK SHDQNYFYRD SFTDQIAESF LRILPSQLPQ VEPARSTPST 60 TASGEYSGVS TMVKKLNHNA SERDRRQKIN RLYSSLRSLL PADQMKKLSI PNTISRVVKY 120 VPELQKQVEG LIRKREELLV RISKQEDQEL HEEKKMKSTA GSSLSAVSTY RLNDREVAIQ 180 ISTLKTHNNL LSEILLNLEE EGLQILNASS FESSGERVFY NLHLQVERSY RLECENLSEK 240 LMSFYA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 156 | RKREELLVRISKQEDQELHEEKKMK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G040100.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020423446.1 | 1e-176 | transcription factor ORG2 isoform X2 | ||||
TrEMBL | A0A251N6E5 | 1e-179 | A0A251N6E5_PRUPE; Uncharacterized protein | ||||
STRING | XP_008244842.1 | 1e-163 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 1e-59 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G040100.2.p |
Entrez Gene | 18770103 |