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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.7G023300.2.p |
| Common Name | PRUPE_ppa009512mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
G2-like |
| Protein Properties |
Length: 290aa MW: 31486.3 Da PI: 8.4471 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G023300.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 105.6 | 2.8e-33 | 46 | 100 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
Prupe.7G023300.2.p 46 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 100
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MYHAKKFSTA SLVPHKPQSS EELANVGVVS GGSSVKSPTP SGGSGKQRLR WTSDLHDRFV 60
DAITQLGGPD RATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYLPESPAD GSKDEKKGSG 120
DSLSCSDSSP GVQINEALRM QMEVQKRLHE QLEVQRQLQM RIEAQGKYLQ KIIEEQEKLG 180
GVLKGSDALP SAEDKQKPSQ LETAGDASAT PSSPRKKQRV DDGLPDGCTT SNVPPKADQK 240
NEFVGQWDRD LYGSDGGFGF NLQREFKERD GDAAQKAPME LDPLCGSKQ*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FR828552 | 0.0 | FR828552.1 Rosa hybrid cultivar mRNA for putative MYB transcription factor (myb1 gene), cultivar Yellow Island. |
