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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G014100.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 504aa MW: 56128.1 Da PI: 4.5058 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 90.4 | 3.2e-28 | 16 | 180 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkklelee.................................vikevdiykvePwdLpk....kvkaee 55 p frFhP++ee+v + Lk+kveg++ ++ i+e+d+yk+ePwdL + + Prupe.7G014100.2.p 16 LPKFRFHPSEEEMV-NLLKNKVEGQDSQAMPdeivdkpwdlpdnesiqlfcrflkrmmqgkasqSIPEIDVYKYEPWDLAElmfpDSPYQP 105 5779**********.99*********5553356788999999999*****************977**************844455333377 PP NAM 56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + w+ Fs+ d kya+++r nrat +g+Wk tgk ++v+s+ ++++ k+tL+f++gr +k+++t Wv +ey l Prupe.7G014100.2.p 106 RAWFSFSRPDYKYANSSRCNRATGKGFWKITGKPRQVKSRqlPKSVTCKKRTLTFHEGRVSKSRNTGWVRQEYYL 180 8**************************************866566677889**********************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 31.389 | 15 | 203 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-12 | 17 | 179 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.49E-30 | 62 | 203 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence Send to blast |
MSSSMSTTEE SVLDLLPKFR FHPSEEEMVN LLKNKVEGQD SQAMPDEIVD KPWDLPDNES 60 IQLFCRFLKR MMQGKASQSI PEIDVYKYEP WDLAELMFPD SPYQPRAWFS FSRPDYKYAN 120 SSRCNRATGK GFWKITGKPR QVKSRQLPKS VTCKKRTLTF HEGRVSKSRN TGWVRQEYYL 180 TPTDPGSNPN QLSGFVLCRM KNKSTDNESD DKKQQDVSIC VESADPGIAG CMASNSELDQ 240 AAGIHLIPEA EEHLTYKELE HVLLGSGNQN DGEPNGFVSS DFDDMIQELC AKGGEYLDSP 300 SPPERPHQHQ LPQLGNVPVT GDYVGSNSNN QAAAINHMIP HPEDFLTYKE LEHVLGTCNP 360 DAGEPGGCVS SNMLQKLCAQ LGEELDSPIP PPGPPELGNA TYVYTDECSS WPSPIGDNDS 420 SLPNKNSIPT NYESKPVSYD SKPVSNTASN FENQTRISEV YSQAEENLES FFRQFELEGD 480 FLHANNYIGC NESQSATLFP QSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-20 | 1 | 209 | 1 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G014100.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020425054.1 | 0.0 | protein NTM1-like 9 | ||||
Refseq | XP_020425055.1 | 0.0 | protein NTM1-like 9 | ||||
TrEMBL | A0A251N4Y4 | 0.0 | A0A251N4Y4_PRUPE; Uncharacterized protein | ||||
TrEMBL | A0A251N4Z7 | 0.0 | A0A251N4Z7_PRUPE; Uncharacterized protein | ||||
STRING | EMJ06082 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.2 | 8e-30 | NAC domain containing protein 50 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G014100.2.p |