![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.7G014100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 510aa MW: 56785.9 Da PI: 4.5147 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 90.3 | 3.3e-28 | 22 | 186 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkklelee.................................vikevdiykvePwdLpk....kvkaee 55 p frFhP++ee+v + Lk+kveg++ ++ i+e+d+yk+ePwdL + + Prupe.7G014100.1.p 22 LPKFRFHPSEEEMV-NLLKNKVEGQDSQAMPdeivdkpwdlpdnesiqlfcrflkrmmqgkasqSIPEIDVYKYEPWDLAElmfpDSPYQP 111 5779**********.99*********5553356788999999999*****************977**************844455333377 PP NAM 56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + w+ Fs+ d kya+++r nrat +g+Wk tgk ++v+s+ ++++ k+tL+f++gr +k+++t Wv +ey l Prupe.7G014100.1.p 112 RAWFSFSRPDYKYANSSRCNRATGKGFWKITGKPRQVKSRqlPKSVTCKKRTLTFHEGRVSKSRNTGWVRQEYYL 186 8**************************************866566677889**********************87 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 31.389 | 21 | 209 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-12 | 23 | 185 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.62E-30 | 68 | 209 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 510 aa Download sequence Send to blast |
MIAEGRMSSS MSTTEESVLD LLPKFRFHPS EEEMVNLLKN KVEGQDSQAM PDEIVDKPWD 60 LPDNESIQLF CRFLKRMMQG KASQSIPEID VYKYEPWDLA ELMFPDSPYQ PRAWFSFSRP 120 DYKYANSSRC NRATGKGFWK ITGKPRQVKS RQLPKSVTCK KRTLTFHEGR VSKSRNTGWV 180 RQEYYLTPTD PGSNPNQLSG FVLCRMKNKS TDNESDDKKQ QDVSICVESA DPGIAGCMAS 240 NSELDQAAGI HLIPEAEEHL TYKELEHVLL GSGNQNDGEP NGFVSSDFDD MIQELCAKGG 300 EYLDSPSPPE RPHQHQLPQL GNVPVTGDYV GSNSNNQAAA INHMIPHPED FLTYKELEHV 360 LGTCNPDAGE PGGCVSSNML QKLCAQLGEE LDSPIPPPGP PELGNATYVY TDECSSWPSP 420 IGDNDSSLPN KNSIPTNYES KPVSYDSKPV SNTASNFENQ TRISEVYSQA EENLESFFRQ 480 FELEGDFLHA NNYIGCNESQ SATLFPQSS* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-20 | 7 | 215 | 1 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.7G014100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020425054.1 | 0.0 | protein NTM1-like 9 | ||||
Refseq | XP_020425055.1 | 0.0 | protein NTM1-like 9 | ||||
TrEMBL | A0A251N4Y4 | 0.0 | A0A251N4Y4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ06082 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17148 | 2 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10480.2 | 8e-30 | NAC domain containing protein 50 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.7G014100.1.p |