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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G013900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 432aa MW: 48224.9 Da PI: 4.9675 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.2 | 2.3e-21 | 62 | 180 | 13 | 128 |
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 +l +++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ d k+a++ r nrat +g+Wk tgk ++ +s+ + Prupe.7G013900.1.p 62 QLFCRFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPDYKSANSPRCNRATGKGFWKITGKPRQAKSRqlPK 149 68899********99666...**************8444553333778************************************9986656 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++ k+tL+f++gr +k+++t v +ey l Prupe.7G013900.1.p 150 SVTCKKRTLTFHEGRVSKSRNTGCVRQEYYL 180 6677889*********************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 25.196 | 15 | 203 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-10 | 17 | 179 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.24E-23 | 62 | 203 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 432 aa Download sequence Send to blast |
MSRSMSTTKE SVLDLLPKFR FHPSEEEMVN LLKNKVEGQD SQAIPDEIVD KPRDLPDNES 60 IQLFCRFLKR MMQGKASQSI PEIDVYKYEP WDLAELMFPD SPYQPRAWFS FSRPDYKSAN 120 SPRCNRATGK GFWKITGKPR QAKSRQLPKS VTCKKRTLTF HEGRVSKSRN TGCVRQEYYL 180 TPTDPGSNPN QLSGFVLSRM KNKSTDNESD NKKHQDVSVC VESADPGISG CMASNSELDQ 240 AAGIHLISDA EEHLTYKELE HVLLGSGNQN DGEPGGFVSS DFDDMIQELC AKGGEYLDLP 300 SPPPELPRQR QPPQLGNVPV TGDYIGSNSN NQAAAINHMI PDPEELLAYK ELERVLGSCN 360 PDDGEPGGCV SSNMLQKVYS QAEENLESFF RQFEPEDYIL PIVPRTGRFL HANNYIGCNE 420 LQSAALFPQS S* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-15 | 10 | 209 | 10 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G013900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020424196.1 | 0.0 | NAC domain-containing protein 68 | ||||
TrEMBL | A0A251N520 | 0.0 | A0A251N520_PRUPE; Uncharacterized protein | ||||
STRING | EMJ04851 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17148 | 2 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.2 | 1e-25 | NAC domain containing protein 50 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G013900.1.p |