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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.7G001400.1.p |
Common Name | PRUPE_ppa005770mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
NAC |
Protein Properties |
Length: 460aa MW: 51029.4 Da PI: 5.9741 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.7G001400.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 180.2 | 5.2e-56 | 18 | 148 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdee+++ yL++kv ++++ + +i e+d++k+ePwdLpkk+k +ekewyfF++rd+ky+tg r+nrat+sgyWkatgkdke
Prupe.7G001400.1.p 18 LPPGFRFHPTDEEIITSYLTEKVIDSSFVA-IAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKE 107
79*************************988.78***************99999************************************** PP
NAM 92 vlskkgel...vglkktLvfykgrapkgektdWvmheyrle 129
++++kg++ vg+kktLvfy+grapkgekt+Wvmheyrle
Prupe.7G001400.1.p 108 IFNNKGKAgclVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 148
***85555666****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 460 aa
Download sequence Send
to blast |
MEQNMVVNRG AEDQLIELPP GFRFHPTDEE IITSYLTEKV IDSSFVAIAI GEADLNKCEP 60 WDLPKKAKMG EKEWYFFCQR DRKYPTGMRT NRATESGYWK ATGKDKEIFN NKGKAGCLVG 120 MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK ISQYTNLSKA AKDEWVVCRV FHKNMGLKKI 180 NNTPTRMNSF GDHDLLDYSS LPPLMDPTSF NDNLMNNNDN KACGYGDHDV KPGANLASTA 240 PSLSSAKASS SDDHHAINNN NYLSYFSIGG SGGQVQKPNY SFQVQPTNSY YQATSLSNNP 300 NMLYPHHHQF QNPNPNPNPS SFWFQPNPNN SDYFQQGMIR VTNNTTSDHD EDDQAMLRAI 360 AAANNSNMNN ETSSSAAAGF GSSGGLARQC KVEQFSSAPE SMFSLSQDTG VSTDINTTEI 420 SSSLVSSKQE LGSAADNCSS YDQRPSVVPI SDIEGLWDF*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-52 | 16 | 179 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-52 | 16 | 179 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-52 | 16 | 179 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-52 | 16 | 179 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 3e-52 | 16 | 179 | 15 | 171 | NAC domain-containing protein 19 |
4dul_B | 3e-52 | 16 | 179 | 15 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF198125 | 7e-82 | KF198125.1 Malus hupehensis NAC domain protein (NAC112) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G18270.1 | 1e-110 | Arabidopsis NAC domain containing protein 87 |