PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G351000.2.p
Common NamePRUPE_ppa005708mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 456aa    MW: 51043.4 Da    PI: 4.9572
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G351000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.82.8e-29231282155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         kpr+rWt+eLHe+Fveav+qL   + AtPk il+lmkv+gLt++hvkSHLQkYR+
  Prupe.6G351000.2.p 231 KPRMRWTQELHEAFVEAVNQL---DGATPKGILNLMKVEGLTIYHVKSHLQKYRT 282
                         79*******************...88****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.49228285IPR017930Myb domain
SuperFamilySSF466892.06E-16229282IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.6E-28230284IPR009057Homeodomain-like
TIGRFAMsTIGR015577.8E-23231282IPR006447Myb domain, plants
PfamPF002493.7E-9233281IPR001005SANT/Myb domain
PfamPF143791.4E-19313360IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MSNFGSSKAM SSSFPNLSTP LDDKYSRLPD SFQVTSQREK TRYSKLPQDS SPGHLFSSSS  60
RPNDVHFSSV SPCESRSQNS PFIFKLPVDE KSLSLTHSSH SEVQPTALIN YSEENKDISW  120
YPDSLQEFLH FPENVPDQTG LVDSSTGVIT SEDHAEKTDW SDWDPLISFD DALDPNWELP  180
IDVDAVDPKP KVLNPYSDIL VQPPQIQQHQ PVQSEEFRPS PETLSTAPPT KPRMRWTQEL  240
HEAFVEAVNQ LDGATPKGIL NLMKVEGLTI YHVKSHLQKY RTARYKPESS EGACEKVSTP  300
VEETNSLDLK ASMGITEALR LQVELQKRLH EQLENQRKLQ LQIEEQGKYL EKMFEQQRKM  360
EDSRVKAASS TVDDHATPPS NLVCPSPGED KPETSKHDHG KTPISASSMS TPLEEGSQDA  420
NRKKQKAQET VSQEEPDHPG DVESGTQPTK RARNG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-25231286260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.37920.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G351000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020421921.10.0protein PHR1-LIKE 1 isoform X1
TrEMBLA0A251P0810.0A0A251P081_PRUPE; Uncharacterized protein
STRINGEMJ063960.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.21e-84G2-like family protein