PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G294900.1.p
Common NamePRUPE_ppa025912mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 337aa    MW: 37716.7 Da    PI: 6.596
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G294900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.71.2e-23148208259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg +WrKYGqK + ++++pr+Y+rCt++    C+++k+v++ ++dp ++ +tY g+H+++
  Prupe.6G294900.1.p 148 EDGQAWRKYGQKLILNAKHPRNYFRCTHKfdqACQATKHVQQVEDDPPLFRTTYYGNHTCR 208
                         79**************************99999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-23139208IPR003657WRKY domain
PROSITE profilePS5081119.818142205IPR003657WRKY domain
SuperFamilySSF1182904.45E-23145208IPR003657WRKY domain
SMARTSM007743.3E-35147209IPR003657WRKY domain
PfamPF031061.6E-23148208IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEELIHGREV ASGQLGRVIN LHNNRSLTVN GDHNHDLGSG NGEGFVNKML GSFSNTLFIS  60
NGKEMKEFHH HDQIIQVNTS GGGGGGAGAG AGASSWDVDH LLDHAIKCEA SNEETCKSAS  120
TSSTDRRGSY KKRKTCHSWI KDSPALTEDG QAWRKYGQKL ILNAKHPRNY FRCTHKFDQA  180
CQATKHVQQV EDDPPLFRTT YYGNHTCRDH LKACELVLDC TSPRESSKFI RFDDNNLSSK  240
QEHPFFSSFK SLKREECFKE ETTPSDYMTT QHHNQLALSD YLVSPPDLPA FTSPGLMSGF  300
ASANTAQLDE DAIYRKMAGF NYDDFAFDEF LQYELR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-24148208969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G294900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021832036.10.0probable WRKY transcription factor 38
TrEMBLA0A251NXF50.0A0A251NXF5_PRUPE; Uncharacterized protein
TrEMBLM5W3W00.0M5W3W0_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ080110.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-28WRKY DNA-binding protein 70