PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G284400.1.p
Common NamePRUPE_ppa022996mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 518aa    MW: 58370.7 Da    PI: 4.4771
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G284400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-1970127155
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpse.ng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         + y+GVr++  +g+WvAeIr+p++  g   k+ r +lg+f ta++Aa a+++a+++++g
  Prupe.6G284400.1.p  70 CVYRGVRQRT-WGKWVAEIREPNNfSGvskKNSRLWLGTFPTAYDAAFAYDEAARAMYG 127
                         68*****999.***********9988899566***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.8E-1270127IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-2971136IPR001471AP2/ERF domain
PROSITE profilePS5103222.04971135IPR001471AP2/ERF domain
SuperFamilySSF541715.49E-1971136IPR016177DNA-binding domain
SMARTSM003801.9E-3371141IPR001471AP2/ERF domain
CDDcd000181.19E-2772135No hitNo description
PRINTSPR003676.0E-97283IPR001471AP2/ERF domain
PRINTSPR003676.0E-9101117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MTSEASDGDK KLPKRRNGCD SIEDTLAKWK NYNDRFDFAK DGVKKKRKAP SKGSKKGCMK  60
GKGGPENSDC VYRGVRQRTW GKWVAEIREP NNFSGVSKKN SRLWLGTFPT AYDAAFAYDE  120
AARAMYGGLA RLNFPQNTMK LKEYSNSVYS GTTKTTTSSS YESSTTYNNG DEAEGLDMSS  180
KCAMESSRFV VGKSKESYDF FEDCVHKEPK QETDCSVGFA SQDLEVLDAT LREAKDVKCE  240
LETEYELARN DAEETSVFQT GSYESFNHRP DYLHNELQVV NLDSVPDGKP YYNDWESLET  300
FLRSNNDYLN NELVDAECNG RNDCNPSEDV NVEKPVTSEA MEKEFPMILE SGSHNGLDDS  360
CHYMHNEQTN VASNLVTADF EPSNDEIKRS MTDQELRGGL VETTNLNGHN GFIDSYACLD  420
DIRPSNDIKM QENRLANLHN WSVEESYGID AQNQQGERLP NLPNQSQTQP QGNIPGRLAH  480
TEEASLDIDF DVDLFRQNYD SGVLEEQVFH GSWFPYS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-1872135360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G284400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007208591.20.0uncharacterized protein LOC18773985
TrEMBLA0A251NWY20.0A0A251NWY2_PRUPE; Uncharacterized protein
STRINGEMJ097900.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2220944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11020.11e-24DRE/CRT-binding protein 2B