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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.6G223100.1.p |
Common Name | PRUPE_ppa010480mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
LBD |
Protein Properties |
Length: 249aa MW: 26876.2 Da PI: 9.7175 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.6G223100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 62 | 1.6e-19 | 24 | 98 | 23 | 97 |
DUF260 23 paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
p + ++++ +v+k+FG++ ++++++a+p+++r+ +++sl++eA+ r+ +Pv+Gavg++++++++++q+++e++l+
Prupe.6G223100.1.p 24 PRSPSHATVFVAKFFGRAGLMSFISAVPDSQRPVLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLR 98
45556999*************************************************************998876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MPSSPKGLQR ILHAPPLPPV DRNPRSPSHA TVFVAKFFGR AGLMSFISAV PDSQRPVLFQ 60 SLLFEACGRT VNPVNGAVGL LWTGNWHVCQ AAVETVLRGG TLRPIPELLG GGSTSDEASD 120 ADGGGVNNCT DMWRLRDPSH NSGSSSRFTS SRSARVSSPK RKRSADEESS TKVLQLQHHA 180 DLDLRLTPSP TFKAKPKPET RRAGTPSMNS EESVVTTCFE SGLPDNHHQY NQHSYGVGAE 240 RKLLNLFP*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |