 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.6G134400.1.p |
| Common Name | PRUPE_ppa010337mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
NAC |
| Protein Properties |
Length: 254aa MW: 28999.5 Da PI: 5.5214 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.6G134400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 152.6 | 1.9e-47 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87
lppG+rF Pt+eelv++yL +k+egk+ ++ +vi+ vdiy+ ePwdLpk +++++++w+fF++r++++a+g r+nr+t+sgyWkatg
Prupe.6G134400.1.p 4 LPPGYRFYPTEEELVSFYLLNKLEGKRDDTRRVIPVVDIYSKEPWDLPKfsgeLCHGDTEQWFFFTPRQQREAQGGRPNRTTASGYWKATG 94
79****************************99****************656754445777******************************* PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+
Prupe.6G134400.1.p 95 SPGYVYSSDNKVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135
***************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MEELPPGYRF YPTEEELVSF YLLNKLEGKR DDTRRVIPVV DIYSKEPWDL PKFSGELCHG 60
DTEQWFFFTP RQQREAQGGR PNRTTASGYW KATGSPGYVY SSDNKVIGVK KTMVFYKGKA 120
PTGRKTKWKM NEYRAIEADN PTTTSTSVPK YLRNEFRLCR VYVVSGSCRA FDRRPLEGSG 180
ETKHQLSESM GGTSTFSLKA PMVEKASSSD ETFSYSEELA DLPETYAGIN STNWEIIEGL 240
EQPLWEWEQL NLL*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-37 | 4 | 162 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-37 | 4 | 162 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-37 | 4 | 162 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-37 | 4 | 162 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 3swm_B | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 3swm_C | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 3swm_D | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 3swp_A | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 3swp_B | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 3swp_C | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 3swp_D | 8e-37 | 4 | 162 | 20 | 166 | NAC domain-containing protein 19 |
| 4dul_A | 7e-37 | 4 | 162 | 17 | 163 | NAC domain-containing protein 19 |
| 4dul_B | 7e-37 | 4 | 162 | 17 | 163 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT051766 | 2e-43 | BT051766.1 Medicago truncatula clone MTYF5_F6_F7_F81G-H-6 unknown mRNA. |
