PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G133600.1.p | ||||||||
Common Name | PRUPE_ppa019846mg, PRUPE_ppa023583mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 373aa MW: 42101 Da PI: 4.5695 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 75.7 | 1.1e-23 | 11 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvka....eekewyfFskrdkkyatgkrknratksg 81 +ppG++F P+++el+ +yL++kv++++++ e++ + ++++y+ +P+++ + + ++++y F++ ++k+++g+r +r++ sg Prupe.6G133600.1.p 11 VPPGYHFCPSEQELLLYYLRPKVNAEEVPGENHvVFDFNLYSDQPRKIWDhfqttR--QndlkMSNDLYLFTELQTKTTNGSRVSRTVGSG 99 69*************************88876659999**********63244331..2223233477*********************** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wk k++++ +++++g+kk + + ++ ++e+ +W+m+e++l Prupe.6G133600.1.p 100 TWKGEDGGKKICAPgTDHVIGIKKRFRYE--NKGSAEHGKWLMNEFEL 145 ***9999999999867788********98..44555678*******87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.45E-28 | 8 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 30.849 | 11 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.9E-16 | 12 | 145 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MAEDGYAYDR VPPGYHFCPS EQELLLYYLR PKVNAEEVPG ENHVVFDFNL YSDQPRKIWD 60 HFQTTRQNDL KMSNDLYLFT ELQTKTTNGS RVSRTVGSGT WKGEDGGKKI CAPGTDHVIG 120 IKKRFRYENK GSAEHGKWLM NEFELGQSLI HNRQAKKYVL CLLRKKEEPE KKRKEPEEED 180 RRQVLCLQTQ EKRQRMLPCI DNLPPPHPQP QPLENYAFVA ELPVTQSLKP WIDNSPPLAA 240 QVQDENLGQE LLTSCVDFVP SFASEELSIL EWDERLWEPF VLQSVDDVPE PVAVGTTMQG 300 AENEVIYTAS TSALPIDCTG HTATQADNPQ SNVFGGLGGL DDSFNCTPWI NSVEGEPASG 360 INTTEEDNLR QS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G133600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021806109.1 | 0.0 | NAC domain-containing protein 12-like | ||||
TrEMBL | M5W7Q2 | 0.0 | M5W7Q2_PRUPE; Uncharacterized protein | ||||
STRING | EMJ09360 | 0.0 | (Prunus persica) | ||||
STRING | EMJ09772 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF20514 | 3 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 2e-17 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G133600.1.p |
Entrez Gene | 18773248 | 18773693 |