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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G103600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 458aa MW: 51916.2 Da PI: 4.2294 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.7 | 1e-18 | 8 | 144 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv..ePwdLpk.....kvkaeekewyfFskrdkkyat.gk.rknratk.. 79 +GfrF+Ptdeel++ +L k v +kk +++i++++i+ + eP+++ + +++ +++e+yfFs+ ++ +++ g+ + nr++ Prupe.6G103600.1.p 8 VGFRFRPTDEELITLFLYKMVVEKKalmAAYDTIIRKFNIFGTefEPSEIWNgfggeQLHPHDQELYFFSELNTLSSKaGSrKINRKVGlg 98 7*******************99999774334456*****9855339****75466666666999******998877653441557765555 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g+W+ +v++++g+++g k+ + + + + + e++ W+++ey+l Prupe.6G103600.1.p 99 GGTWSGERC-DAVYDEEGNEIGHKRKFRYEN--EGSEEHSGWFLEEYSL 144 999*98766.678888************984..334469********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.801 | 6 | 161 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.31E-18 | 8 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.8E-14 | 8 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MADSDDRVGF RFRPTDEELI TLFLYKMVVE KKALMAAYDT IIRKFNIFGT EFEPSEIWNG 60 FGGEQLHPHD QELYFFSELN TLSSKAGSRK INRKVGLGGG TWSGERCDAV YDEEGNEIGH 120 KRKFRYENEG SEEHSGWFLE EYSLSGEGCA FDFVICRLRK NERLFGNKRK SSSSLSERQY 180 PKKKMLTKPK PSLTTKGKKV KKDEQQMGSQ ENMNLEPQNY RSPSTLVVSD DEKGNNQLTY 240 NNHDDQFINN SNYFPDDNTM MVNEIITLDD INTLDDTKMI FSDMEWPLPE LPQIADQNHV 300 PLPASSVGAD SVDGVIEACE PSNLVNDNQM GSNNSDEHQD QLLNNTDYCP HDTLIFLGDS 360 DEEGYLINSP TIDDYMDELF PDLAGEWPLP QMPQIAATDE SQVPFPTSEV GAESTKGGEM 420 EAYCNPSHFQ HMGNYQPLEE DINCFSNYSF VDELIGH* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G103600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020421236.1 | 0.0 | NAC domain-containing protein 89 | ||||
TrEMBL | A0A251NN91 | 0.0 | A0A251NN91_PRUPE; Uncharacterized protein | ||||
STRING | EMJ07747 | 1e-145 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF39806 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 4e-09 | NAC domain containing protein 86 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G103600.1.p |