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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G098600.1.p | ||||||||
Common Name | PRUPE_ppa017586mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 349aa MW: 39831.7 Da PI: 8.2781 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159 | 2e-49 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGf+FhP+deel+v+yL++kv +++l++ + i+e+++yk++Pw+Lp+++ +e+ewyfFs+rd+ky++g r+nra++sgyWka +dk+ Prupe.6G098600.1.p 15 LPPGFKFHPSDEELIVHYLRNKVISHPLPA-QLITEINLYKYNPWELPNNAFFGEDEWYFFSPRDRKYPNGVRPNRAAASGYWKAASSDKP 104 79****************************.89***************77667899*********************************** PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +l++ +++ +g+kk Lvfy+grapkg+kt+W+m+eyrl Prupe.6G098600.1.p 105 ILTSrGSKRIGVKKALVFYTGRAPKGVKTEWIMNEYRL 142 *99867788***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.07E-60 | 11 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.522 | 15 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.6E-26 | 16 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MEKESTFPSS ALQLLPPGFK FHPSDEELIV HYLRNKVISH PLPAQLITEI NLYKYNPWEL 60 PNNAFFGEDE WYFFSPRDRK YPNGVRPNRA AASGYWKAAS SDKPILTSRG SKRIGVKKAL 120 VFYTGRAPKG VKTEWIMNEY RLLDDTVKPS RLKGSMRLDD WVLCRVQHRG NRSKNACNSQ 180 DSYSTEFWRY PPKVEQTQPT YANLHADIIT DFPYKDCQLL ASILSSQAPS PTETNSSVSF 240 QGSKDSYEVR SNNMVKSTIS ISSSGIDSNT LKMKTTEENM KENHFPLINN RESKKIDENL 300 PPSMRPAGNA INCYIPNHSQ YDLLNAHPTD PTNFEEFNEM TFPGTYFE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-68 | 1 | 166 | 4 | 162 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-68 | 1 | 166 | 4 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-68 | 1 | 166 | 4 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-68 | 1 | 166 | 4 | 162 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
3swm_B | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
3swm_C | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
3swm_D | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
3swp_A | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
3swp_B | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
3swp_C | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
3swp_D | 2e-68 | 1 | 166 | 7 | 165 | NAC domain-containing protein 19 |
4dul_A | 1e-68 | 1 | 166 | 4 | 162 | NAC domain-containing protein 19 |
4dul_B | 1e-68 | 1 | 166 | 4 | 162 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G098600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007207937.1 | 0.0 | NAC domain-containing protein 2 | ||||
TrEMBL | M5W733 | 0.0 | M5W733_PRUPE; Uncharacterized protein | ||||
STRING | EMJ09136 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2416 | 29 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 2e-75 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G098600.1.p |
Entrez Gene | 18774248 |