![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.6G098400.1.p | ||||||||
Common Name | PRUPE_ppa019897mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 82aa MW: 9538.84 Da PI: 6.076 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 24.1 | 1e-07 | 10 | 77 | 4 | 64 |
NAM 4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk...kvkaeekewyfFskr 64 f+F Ptd+e++ L k + +++ l+ + ++++ d++ + ePw++ + + +++++yf ++ Prupe.6G098400.1.p 10 AFHFPPTDQEIIRSILYKMLVEREplnLSYKGIVHDKDLFGTkEPWKIWEdygGDQLHDQDLYFLCQL 77 699***************9877776766666789999*998779****75233223367789999875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.45E-7 | 5 | 77 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 10.324 | 7 | 81 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 82 aa Download sequence Send to blast |
MANSRHVSLA FHFPPTDQEI IRSILYKMLV EREPLNLSYK GIVHDKDLFG TKEPWKIWED 60 YGGDQLHDQD LYFLCQLSSR G* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.6G098400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_008225757.1 | 3e-46 | PREDICTED: uncharacterized protein LOC103325369 | ||||
TrEMBL | M5W322 | 2e-54 | M5W322_PRUPE; Uncharacterized protein | ||||
STRING | EMJ07761 | 3e-55 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.6G098400.1.p |
Entrez Gene | 18774436 |