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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G098300.1.p | ||||||||
Common Name | PRUPE_ppa017531mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 28556.3 Da PI: 8.7688 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.9 | 1.4e-17 | 10 | 140 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkat 86 f+FhPtd+e++ L k v +++ + + ++++ d++ + ePw++ + + + +++++yf ++ ++ + ++r++r + +g+W++ Prupe.6G098300.1.p 10 AFHFHPTDQEIIRSILYKMVIEREplnPSYHGIVHDEDLFGTkEPWKIWEdygRDQLHDQDLYFICQLKRINYCSSRTHRrIGCEGTWSQR 100 69*****************988887765556679999*998779****74334434477899******9999999999885667******* PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k +++ + + +g + L + + ++ ++++W+++ey+l Prupe.6G098300.1.p 101 VAPKLIYDGNPNPIGNVRKLRYKN--PKSEHNAEWFLDEYSL 140 ********9999**********84..444469********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-19 | 4 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 21.955 | 7 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.7E-11 | 10 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MANSRNVSLA FHFHPTDQEI IRSILYKMVI EREPLNPSYH GIVHDEDLFG TKEPWKIWED 60 YGRDQLHDQD LYFICQLKRI NYCSSRTHRR IGCEGTWSQR VAPKLIYDGN PNPIGNVRKL 120 RYKNPKSEHN AEWFLDEYSL FVGDEGHDQT TPGFDFVVCR LRKNHNKING YFLLAARSHN 180 GNQGLTIMLI HRDSPESPTP LPTQPHTSTN NSKTQFSSYP KLACRPSTSN PKLILLSIMF 240 NNRILC* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G098300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020421234.1 | 1e-125 | NAC domain-containing protein 68 | ||||
TrEMBL | M5W5X7 | 0.0 | M5W5X7_PRUPE; Uncharacterized protein | ||||
STRING | EMJ08746 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.1 | 2e-10 | Arabidopsis NAC domain containing protein 87 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G098300.1.p |
Entrez Gene | 18773089 |