![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.6G092100.1.p | ||||||||
Common Name | PRUPE_ppb020756mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 377aa MW: 43599.4 Da PI: 4.4683 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.9 | 3.5e-18 | 5 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratk.sgy 82 GfrF+Ptd+e++ ++L k v +++ + ++vi ++++ +k eP+++ + + + +++++yf s+ ++ +g r++r+t g+ Prupe.6G092100.1.p 5 LGFRFDPTDQEIIGFFLYKVVVANNpltlmPPYNKVIYKCNLfgNKREPSEIWRDYGGdqlDDQDLYFVSELQR---NGLRTQRKTGsCGT 92 6******************98888778886666678****9833577*****7533322236667888888766...6899999776479* PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 W++t + ++v+++ +e +g k+ + + +g++++ ++ W+++ey+l Prupe.6G092100.1.p 93 WSETETYQDVKDEVDEIIGRKRKFRYENGNTSE-DHAGWLLDEYSL 137 *************99***********9998888.89********97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.972 | 3 | 163 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.45E-20 | 4 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-13 | 6 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 377 aa Download sequence Send to blast |
MTQLLGFRFD PTDQEIIGFF LYKVVVANNP LTLMPPYNKV IYKCNLFGNK REPSEIWRDY 60 GGDQLDDQDL YFVSELQRNG LRTQRKTGSC GTWSETETYQ DVKDEVDEII GRKRKFRYEN 120 GNTSEDHAGW LLDEYSLFEK GCKNRTSRNC YDFDVVICRL RRKCNMNKSG KKRKCSSRDQ 180 SNKKMKRDQS TKETKTENSV GPQIMNDESN QLMINDITTC DQDYLIDTNH KSFNIDELFV 240 ELDREPPLLH SQQLPQIVES QEKPLPTSCL CVNQFDGALE AAASNLSNFE YNSELARSTW 300 QHNMNADDHQ DPNLIFTVDE LLAEDAEPLS TYALDDVYNV VSQPLDQNSC WSKSFMDQTY 360 NSYIYSSIEE EIIADN* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 160 | 185 | RRKCNMNKSGKKRKCSSRDQSNKKMK |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.6G092100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_007206987.1 | 0.0 | protein BEARSKIN2 | ||||
TrEMBL | M5W4C6 | 0.0 | M5W4C6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ08186 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17853 | 3 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G24430.2 | 3e-08 | NAC domain containing protein 38 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.6G092100.1.p |
Entrez Gene | 18775546 |