 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.6G039700.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
ERF |
Protein Properties |
Length: 309aa MW: 34031.9 Da PI: 5.4397 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.6G039700.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.7 | 8.1e-20 | 152 | 201 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +grW+AeIrdp+ r kr++lg+f+taeeAa +++a+ l+g
Prupe.6G039700.1.p 152 KFRGVRRRP-WGRWAAEIRDPT----RrKRVWLGTFDTAEEAATVYDRAAVLLKG 201
89*******.**********84....34*********************977766 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MLLDVSQEQT YISNFISSPS KPMTSFQTIS SVNPMVKFSE QVTTMTKLIT HENQNSPVNP 60 THLPPKLVRI ILTDADATDS SSDEEDSGVR RVKRHVRQIS LELSSPSSSS SPSSSSSSSF 120 SSGHSKRLRK DQRPTKKLGS RSPGSDQTRL NKFRGVRRRP WGRWAAEIRD PTRRKRVWLG 180 TFDTAEEAAT VYDRAAVLLK GPDAVTNFPN AAMTEAKVVT DVVVPAAEES YGCGSPTPNE 240 AATSPTSVLR YDELTPFDGF SYGEVDAFGF DIDLPLSLPD IMLSNNNNFA HDEFGEFDVN 300 DFWVDVIC*
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 156 | 175 | RRRPWGRWAAEIRDPTRRKR |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KT369555 | 0.0 | KT369555.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 23 mRNA, complete cds. |