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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.6G036300.3.p |
Common Name | PRUPE_ppa001924mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
WRKY |
Protein Properties |
Length: 741aa MW: 79955.8 Da PI: 6.0503 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.6G036300.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99.8 | 1.7e-31 | 313 | 370 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+D ynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g Hnh+k
Prupe.6G036300.3.p 313 EDVYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGAHNHPK 370
7****************************************.***************85 PP
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2 | WRKY | 102.8 | 2e-32 | 529 | 587 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+
Prupe.6G036300.3.p 529 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 587
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0009942 | Biological Process | longitudinal axis specification |
GO:0030010 | Biological Process | establishment of cell polarity |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 741 aa
Download sequence Send
to blast |
MAGIDDNVAI IGDWVPPSTS PRAFFSSMLV DDIGSRSMLE PPSSNKTAEF FLGSQEGDTN 60 GKNLSQGNAS GEELNEVGSF SEYKSNSRGG LVERIAARAG FNAPRLNTES IRSSDLSLNS 120 DIRSPYLTIP PGLSPTILLD SPVFLSNSLA QPSPTTGKFP FVSNGHSRSS TLMTEGLDKT 180 NFFEDINTSF AFKPIAESGS FFLGPTSKMG STSFPQQSFP SIEVSVQSEN SSQSIEPTKV 240 QNQNTNNLQL QADFSRTSTE KDNGANSADP RAFDTVGGST EHSPTLDEQP DEEGDQRGSG 300 DSMAAAAGGT PSEDVYNWRK YGQKQVKGSE YPRSYYKCTH PNCQVKKKVE RSHEGHITEI 360 IYKGAHNHPK PPPNRRSAAI GSSNPLNDMR PDIPEQGGPQ SGADGDLVWA STQKANVGAP 420 DWKHENLEVT SSASVGPDYC NQSSSMQAQN GTHLESGDVV DASSTFSNDE DEDDRGTHGS 480 VSLAYDGEGD ESESKRRKIE AYATEMSGAT RAIREPRVVV QTTSEVDILD DGYRWRKYGQ 540 KVVKGNPNPR SYYKCTNAGC TVRKHVERAS HDLKSVITTY EGKHNHDVPA ARNSSHVNSG 600 PSNTMSGQAS SAGIQTHPHR PEPSQVHNSM ARFERPSSLG SFSLPGRHQL GPSHGFSFGM 660 NQPGLANLAM AGLGPGQPKL PVMPVHHPYF AQQRQVNEMG FMLPKGEPKV EPMSESGLNM 720 SNGSSVYQQL MSRLPLGPQM *
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Low expression in senescent leaves (PubMed:11722756). Expressed in both the unfertilized egg cell and the pollen tube (PubMed:21316593). {ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:21316593}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Regulates WOX8 and WOX9 expression and basal cell division patterns during early embryogenesis. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Required to repolarize the zygote from a transient symmetric state. {ECO:0000269|PubMed:21316593}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ950367 | 0.0 | KJ950367.1 Pyrus x bretschneideri WRKY domain class transcription factor (WRKY7) mRNA, complete cds. |