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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.5G221600.1.p |
Common Name | PRUPE_ppa007839mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
NAC |
Protein Properties |
Length: 355aa MW: 39694.4 Da PI: 7.4618 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G221600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 173.5 | 6.5e-54 | 5 | 131 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL+ kv++ +++ ++++ vd++k+ePwdLp k++ +ekewyfF rd+ky+tg r+nrat++gyWk+tgkdk+
Prupe.5G221600.1.p 5 LPPGFRFHPTDEELITYYLCCKVSDVSFTS-KAVAVVDLNKCEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKD 94
79*************************999.88***************988999************************************* PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+++ g lvg+kktLvfykgrap+gek++Wvmheyrle
Prupe.5G221600.1.p 95 IHR-AGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLE 131
**9.999*****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MQDSLPPGFR FHPTDEELIT YYLCCKVSDV SFTSKAVAVV DLNKCEPWDL PGKASMGEKE 60 WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKDIHRAGV LVGMKKTLVF YKGRAPRGEK 120 SNWVMHEYRL ENKHPFKSSK EEWVVCRVFQ KSISLKKPQQ TTTSSQQQQQ TSIESPCEET 180 NSIVNEFGDI ELPNLNSNNI ANSSSGLIST MSSTQSCYNN NINDHSSDVN MSLNMNWGAA 240 REAAASALPT LTWPWPSNLL TPSNLSVNSL LLRALQLRSS NTGAATLDPS YSYNNNNINI 300 NMEQGMPRPM SQFGSGTSAD MNSNFQASSS TRDMMEAVPP QQHPAQPFNL DSIW*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-57 | 2 | 157 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-57 | 2 | 157 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-57 | 2 | 157 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-57 | 2 | 157 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 4e-57 | 2 | 157 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-57 | 2 | 157 | 14 | 171 | NAC domain-containing protein 19 |
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