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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Prupe.5G220700.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
ERF |
| Protein Properties |
Length: 437aa MW: 49386.8 Da PI: 6.6729 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.5G220700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 46.4 | 1e-14 | 188 | 233 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52
ykGVr++k +gr++AeIrdp + +r +lg+f taeeAa+ + + +++
Prupe.5G220700.1.p 188 YKGVRRRK-WGRYAAEIRDPI----QrRRKWLGTFATAEEAAAVYQKKKLE 233
9****998.**********83....35***************999877765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MSSRFHLLTG AQKKLWTSYH CLSCTLVLLS TFCMQYWSHG HTLKQSSPLF SMPLRSKSFP 60
FALPLGFRSF DLKKMPGFKT LVLNQHVKLN KLKTKQPNKE ENTSSVKRIR IIYNDPDATD 120
SSSDDEEYDG KEDRLLHDKR FVSEILVVDT KYESSADVLS HCKTNRGKIG VSMNFYDSKK 180
TKRSSSMYKG VRRRKWGRYA AEIRDPIQRR RKWLGTFATA EEAAAVYQKK KLEFDSIQSL 240
GKTQRDYQNL QLSDKDKGAF ESFQLTERTK HEFQGIPLSE ESQDSSGDAA IETFSAEEAE 300
RVFCHPSPSS VLEISGTASL GIGLKQAKEE SSVEVFGGEG SVQPCFEEEL SILKFPVQPM 360
LPLDIKQLDL GCGENYVFSS LDQFFDGMSD IVDYPAFNDG NGEVICLPAL DSDFGQQDFA 420
WIDQKPEHGM PMKFCS*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 188 | 194 | KGVRRRK |
| 2 | 192 | 211 | RRKWGRYAAEIRDPIQRRRK |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT369552 | 0.0 | KT369552.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 20 mRNA, complete cds. |
