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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.5G210500.3.p |
| Common Name | PRUPE_ppa003436mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
bHLH |
| Protein Properties |
Length: 576aa MW: 63177.2 Da PI: 8.6476 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.5G210500.3.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 55.8 | 8.4e-18 | 271 | 320 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq
Prupe.5G210500.3.p 271 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 320
889*************************9....9*******************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:1902448 | Biological Process | positive regulation of shade avoidance |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 576 aa
Download sequence Send
to blast |
MELPQPRPFG TEGRKPTHDF LSLYSHPTAQ QDPRPPSQGG YLETHDFLQP LERMGKKCIA 60
KEETSVEIST AEKPVSHAAA AAAQPTSSVE HILPGGIGTY TISHISYFNQ RVPKPEGSPV 120
FTVTQPQASS TDRNVEEHSN CSSYTGSGFT LWEESALKNK GKTGKENLGE RPVGIVRGQW 180
TSSERPAQSS SNNHRNCFSA QSSGQKNISF MDMMKSAAKG STQEDELDDE EEFVLKKETS 240
TTTTTATTPY KGDLRVKVDV KGSDQKANTP RSKHSATEQR RRSKINDRFQ MLRELIPHSD 300
QKRDKASFLL EVIEYIQFLQ EKVNKYEGSY QGWNPDPAKL MPWRNNPKLR ESYCDQSRGM 360
NGGSGPALVF AAKFDEKTTS VSPSIPGSSA QNPVESDTST ETTFKAMDHH PGITSKPMPF 420
PLSMQPNFFT PVRSDGAAVP QLPPRLPSDA ENTSQHQSML CQTVSRATDG AAARDKLKEQ 480
ELTIEGGRIN ISSAYSQGLL NTLTQALQNS GVDLSQASIS VQIELGKRAN SRSPIPKSVV 540
KDNEILSSNQ GKRHSRVASG EDSEHAPKKL KTGRN*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots. {ECO:0000269|PubMed:12679534}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
