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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.5G196000.1.p |
| Common Name | PRUPE_ppa007653mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 361aa MW: 40482.7 Da PI: 7.9668 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.5G196000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 180.5 | 4.4e-56 | 17 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL+kkv + ++++ ++i evd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke
Prupe.5G196000.1.p 17 LPPGFRFHPTDEELISHYLHKKVIDISFSC-KAIGEVDLNKSEPWDLPGKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKE 106
79****************************.88***************99999************************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+++ +++lvg+kktLvfy+grapkgek++Wvmheyrle
Prupe.5G196000.1.p 107 IYK-GKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143
***.999*****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MEHVPAGMVE QYEQIDLPPG FRFHPTDEEL ISHYLHKKVI DISFSCKAIG EVDLNKSEPW 60
DLPGKAKMGE KEWYFFCVRD RKYPTGLRTN RATEAGYWKA TGKDKEIYKG KSLVGMKKTL 120
VFYRGRAPKG EKSNWVMHEY RLEGKFSVHN LPKTAKNEWV ICRVFEKNSG GKKTHISGFV 180
RYGALGNEMD PSGLPPLMDS SPYSSKTKLA SESSYVPCFS NPDPTDVQRN QGIVDYMNNP 240
LFGVSSNTSN FFPRAPFSTS FYSAQSAPVA ANFQFPGSVL MQDQSILRAL LENNGSNMRQ 300
SFKTEREMVS VSQETGLTSE MNTEISSVMS NLEMGRRPFG DQEAPAAAAG AVDLDNFWNY 360
*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-56 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-56 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-56 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-56 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 4e-56 | 3 | 173 | 3 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 4e-56 | 3 | 173 | 3 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
