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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.5G184500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
LBD |
Protein Properties |
Length: 362aa MW: 41074.4 Da PI: 5.7324 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G184500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 127.8 | 5.1e-40 | 71 | 171 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
aCaaCk++rrkC+++C+lap fpa+qpk f+n+hklFG+sn++k+lk+l++e + +am+s++y+A++r + PvyG+ +vi++lq ql ++
Prupe.5G184500.1.p 71 ACAACKYQRRKCTPECPLAPFFPADQPKMFQNAHKLFGVSNIVKILKNLEPEMKFEAMRSIIYQANIRDKFPVYGCWEVIWQLQYQLLLAE 161
7****************************************************************************************** PP
DUF260 92 aelallkeel 101
+el++++++l
Prupe.5G184500.1.p 162 EELQAVQAQL 171
*****99885 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MSPILLPTIS SFTFFFFFLL LLILVQLIAT LLLLLKRSSN CFLGFSFSRL PLWFQSLFSP 60 NMTLKGATNS ACAACKYQRR KCTPECPLAP FFPADQPKMF QNAHKLFGVS NIVKILKNLE 120 PEMKFEAMRS IIYQANIRDK FPVYGCWEVI WQLQYQLLLA EEELQAVQAQ LAMYRQHHHH 180 QHQISSVPEY VTSQLELGMA PPNNSLPLFN HNPQPYNNNN NNAMPALPVT QHHHQQQSYS 240 NSSDAAYSSV YIDSKDNNAA NPLWVSNPCT TNNNSNNDNS ETIQSQLGVL QPLSLQPDVV 300 QDYDELHPFF DTIDDRQSYI DSKEAYESSS EESFKDTTQS MEYAENALKN AASCFSLTSV 360 N*
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