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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.5G142400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
Trihelix |
| Protein Properties |
Length: 339aa MW: 37801 Da PI: 5.3831 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.5G142400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 68.1 | 1.7e-21 | 38 | 132 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81
rWt++e+ +Lie+++ +e+++++g+ +p+W+ vs+++++rg++r+p+qC+++w+nl ++kki+++e++ + ++s +++
Prupe.5G142400.1.p 38 RWTRHETFVLIEGKKVVENAVQKGRsrsssalgsdHFEPKWDLVSSYCKQRGVSREPVQCRKRWSNLLVDFKKIRNWESQIKGAAESFWVM 128
8*********************986666777777688*******************************************98888888888 PP
trihelix 82 fdql 85
+++
Prupe.5G142400.1.p 129 RNDV 132
7765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MALDSIKHEG ASSTTSDQVD RQQVPNGSSD DRAKRHPRWT RHETFVLIEG KKVVENAVQK 60
GRSRSSSALG SDHFEPKWDL VSSYCKQRGV SREPVQCRKR WSNLLVDFKK IRNWESQIKG 120
AAESFWVMRN DVRKERKLPG FFDREVYNIL DGNAVTATAA CPLALFIPVQ TDAQSGDGAE 180
AAAAEEEEEE EPGKAANGLQ QDMAEDGLCS DSEESEQEET ESKKENLMQD SPATTVTTPM 240
PSSGTIKEKR GLDSNACGEH ISQEKRKQRR LAIDGCENNY SDQLIRVLER NNALLNAQLE 300
ARNINCHLDR EQRKEQSNSL LAAISKVTDA LVRIADKL*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 263 | 270 | EKRKQRRL |
