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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.5G135400.1.p | ||||||||
Common Name | PRUPE_ppa001291mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 863aa MW: 96115 Da PI: 4.9882 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.7 | 4.6e-53 | 9 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lp GfrF+Ptdeel+++yLk k++g++ e+ +vi+e+d++k+ePwdLpk +k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd Prupe.5G135400.1.p 9 LPLGFRFRPTDEELINHYLKLKINGRNSEV-QVIPEIDVCKWEPWDLPKlsVIKSDDQEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKD 98 699************************999.99***************5458889999********************************* PP NAM 90 kevlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++s+ ++ +vg+kktLvfy+grap+ge+t+W+mheyr+ Prupe.5G135400.1.p 99 RTIKSRqcksasnSTGQVGMKKTLVFYRGRAPRGERTSWIMHEYRA 144 *****988777665566***************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.18E-60 | 4 | 167 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.154 | 9 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.5E-27 | 10 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 863 aa Download sequence Send to blast |
MAVLSMDSLP LGFRFRPTDE ELINHYLKLK INGRNSEVQV IPEIDVCKWE PWDLPKLSVI 60 KSDDQEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSRQCKSAS NSTGQVGMKK 120 TLVFYRGRAP RGERTSWIMH EYRATQKDLD GTAPGQGAFV LCRLFHKPEE KADVLKYDEV 180 EQTGLSPTTT KSSPDETSSD VVQETATSDM QGEKQSESIM RWWNDKSDNM SPDALPPVPG 240 DSYMASDVED PGAEETGIQR HLLMEENQVF DEPFGGQIDC KVFSPMKSLI NSELEHYVGS 300 PFTSDFGNYN NGFHFQDGTC EQDVSFPEFL DEFGINPYAS SCEESTSQKN LVVGNETYLS 360 GQSCMLQTMP PGNSCLDGAW DNTDTNIAQH DLERRASGLY NKQFDAEDLL QKTSLGYYQA 420 KAQASLDNQK PRMGNMAGNY FPPSAFAEQF PVSSVNDMFN SSDGSTSCKN LDNHGGDHGG 480 GTAIKIRARH PQQLQNSGNL VDQGSAPRRL LLCVDKPSSG SIANGNMGDA NYRKEEDEVQ 540 STITEAREDI RQSPTSDEQE KEHAIFNNGE EFSSRKDSVN HGYDQVGRTR IRIKTRQPQQ 600 QSNSENYVTQ GTAPRRIRLQ MNISTGSVVD SNVRDRDDEE EDEVQSTNTD AREAVQQSHT 660 SDGQEKEHAK INNKEELTSR KNSVNYGSDI VGTTGIRIKA RQPQQPLKSD ESVTQGTAPR 720 RIRLQMNPVA DSNVREPTPG KEDEVQSTIN ETRESTQKIP DSDEHDAECR LSKLEVNGKM 780 AEDSPAEMVD KSRETAEEAP GKLKPRMGRD SLLHSNHTGL SVASKALPKR RGLISTFVIS 840 VGIPLAVTLF IAFSGIWIAL RS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
3swm_B | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
3swm_C | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
3swm_D | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
3swp_A | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
3swp_B | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
3swp_C | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
3swp_D | 3e-44 | 4 | 167 | 15 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.5G135400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007210371.1 | 0.0 | NAC domain-containing protein 14 | ||||
TrEMBL | M5WXM8 | 0.0 | M5WXM8_PRUPE; Uncharacterized protein | ||||
STRING | EMJ11570 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13625 | 18 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 1e-135 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.5G135400.1.p |
Entrez Gene | 18777917 |