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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.5G130700.1.p |
Common Name | PRUPE_ppa005343mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
bHLH |
Protein Properties |
Length: 493aa MW: 55169.8 Da PI: 7.5168 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G130700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.1 | 1.4e-12 | 303 | 348 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YI++L
Prupe.5G130700.1.p 303 NHVEAERQRREKLNHRFYALRSVVPNV-----SKMDKASLLSDAVVYINKL 348
799***********************6.....5***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 493 aa
Download sequence Send
to blast |
MEEIMSSCSP NFGQENSATL QQRLQFIVQN RPEWWVYSIF WQASKDSNGQ VALSWAGGHF 60 RSSRDLASKR SNKLVHNYQP KSGFISTERK KVVNREVEAL FNEDMDLDGG DVTDSEWFYF 120 YTVSLTQSFG ACHGTGNILG RAFCSGGFVW LAGDHELQFY ECERVKEARM HGIQTLVCIQ 180 TSCGVLELAS LDVIKEDWGL VELSKSLFGS ENSRVSKPQS SREGHVLVPL LESGMFSAGP 240 QKEWTAQGGT KERFALNIGG SSSDSGPSDS VGNFTTENAE NNGRLKKRGR SSNHGTDRES 300 PINHVEAERQ RREKLNHRFY ALRSVVPNVS KMDKASLLSD AVVYINKLKA KVEELEAKIQ 360 QPPQKPKLGI LSNLEHQSNQ SASSIVDHHR HHHHHQARPR PASSYTNSEV AGAIEVDVKI 420 VGSEAMIRVQ SPDQNYPYAR LMNALKDLEL QVYHASISSV KEMMLQDVVA RVPHGFTSEE 480 AMRTAIIKRW YN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 1e-24 | 14 | 208 | 3 | 192 | Transcription factor MYC3 |
4rqw_B | 1e-24 | 14 | 208 | 3 | 192 | Transcription factor MYC3 |
4rs9_A | 1e-24 | 14 | 208 | 3 | 192 | Transcription factor MYC3 |
4yz6_A | 1e-24 | 14 | 208 | 3 | 192 | Transcription factor MYC3 |
5gnj_A | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
5gnj_B | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
5gnj_E | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
5gnj_F | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
5gnj_G | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
5gnj_I | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
5gnj_M | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
5gnj_N | 4e-25 | 298 | 375 | 3 | 83 | Transcription factor MYC2 |
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