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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.5G130600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
bHLH |
Protein Properties |
Length: 451aa MW: 50419.4 Da PI: 7.1388 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G130600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33.5 | 7.6e-11 | 307 | 353 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr+++P+ K++ ++ L A YI++L+
Prupe.5G130600.1.p 307 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAASYINQLK 353
799***********************6.....5*****************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MEEILSSSSP TNFCQENSST FQKRLQFIFR NRPEWWLYSI FWQASNDSND QVSLSWAGGD 60 FRINRDLATK RSNKVVNNYN PKFGFNNVER RKVVNKDVED LFHEDLVDLA MVDHGDVTDS 120 EWFYFYSVSL TQTFVAGHAS NNVLGRAFCS GGFVWLAGAH ELQFYECERV KEARMHGIQT 180 LVCIATPCGV LELASLDVIK EDCGLVHLSK SLFGSDNNKK VSQEGSCEGN ALVHLLENGM 240 FSGAQKEMTR QGCTKEAAHI NICDSSPDSP SDSVGNFTSE NTANTRSKKK KRSSSTNGAS 300 RASQLLNHVE AERQRREKLN HRFYVLRSVV PNVSKMDRSS LLADAASYIN QLKAKVEELE 360 AKVQEQPKNP KVSNASSIDH QSSQSTSSIV NHPHSSYNNR SVAPLEVDVK ILGSEAMIRV 420 QCPDQDYPYA RLMNALKALG LQFTMQAYQV *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 4e-25 | 15 | 213 | 3 | 192 | Transcription factor MYC3 |
4rqw_B | 4e-25 | 15 | 213 | 3 | 192 | Transcription factor MYC3 |
4rs9_A | 4e-25 | 15 | 213 | 3 | 192 | Transcription factor MYC3 |
4yz6_A | 4e-25 | 15 | 213 | 3 | 192 | Transcription factor MYC3 |
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