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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.5G130300.1.p |
Common Name | PRUPE_ppa022201mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
bHLH |
Protein Properties |
Length: 476aa MW: 53525.2 Da PI: 7.4456 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G130300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.6 | 7.9e-12 | 296 | 342 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+
Prupe.5G130300.1.p 296 NHVEAERQRREKLNHRFYALRSVVPNV-----SKMDRSSLLADAVAYINQLK 342
799***********************6.....5*****************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 476 aa
Download sequence Send
to blast |
MEEIIPSSSP PQLCQENSVS FQQRLQFIVQ NRPEWWVYSI FWQASKDSND QVALSWAGGH 60 CKSPRDLASK RSNKMVNNKH FVERKKVINN REAESLFHEE MDLDMRLVDH VVGDVTDSEW 120 FYFYSISLTQ SFVAGHATNN ILGRSFCSGG FVWLAGDHEL QFYECERVKK ARMHGIQSLV 180 CIATPCGVLE LASPDVIKED LGLVHLSKSL FLSDNNRVSK QDSRDVNALV PPLESGMFSG 240 GQKDLTKQGD TKEAAPINIG GSSSDSADNF TSDNTESTRM KTRGRSSSNH APQLLNHVEA 300 ERQRREKLNH RFYALRSVVP NVSKMDRSSL LADAVAYINQ LKAKTEELED KIQSQPQNPK 360 RGNVSNADHH HYSQSTSPIV DFHHSNNNNT NRAAAALEVD VKILGSEAVI RVQCPDQEYP 420 YAKLMNALKS LRLQVCHASI SNVKDLMIQN VVVRVPYGFI SDEAMRMGII KKWYN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 6e-28 | 15 | 211 | 3 | 192 | Transcription factor MYC3 |
4rqw_B | 6e-28 | 15 | 211 | 3 | 192 | Transcription factor MYC3 |
4rs9_A | 6e-28 | 15 | 211 | 3 | 192 | Transcription factor MYC3 |
4yz6_A | 6e-28 | 15 | 211 | 3 | 192 | Transcription factor MYC3 |
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