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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.5G087600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
bHLH |
Protein Properties |
Length: 486aa MW: 54488.1 Da PI: 7.5413 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G087600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 35.5 | 1.8e-11 | 310 | 356 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+
Prupe.5G087600.1.p 310 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 356
799***********************6.....5*****************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 486 aa
Download sequence Send
to blast |
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWLYWI FWQSSKDSND QVSLSWAAGD 60 FRVNSDLASK RNNKVSNNHQ PKFGFNKKVT SREAEEALFD EDMADLEMRL VDHEDVTESE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK EARMHGIQTL 180 VCIATPCGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNN NRVSQQKGSR EGNVLAPLLA 240 NGIFSGSQKE LTRQAAGTKE AAPFNIGGSS PESLSGSVGN FTCENTGNTR SKKRRRSSNN 300 GASRESSLLN HVEAERQRRE KLNHRFYLLR SVVPNVSKMD RSSLLADAVA YINQLKAKVE 360 ELELKTQAQP QNPKKVSVNN LDNQCSQSTS SIVDHHSSYN NTKVVPVEVD VKIMGSEAII 420 RVQCQDQDYP YARLMNALKG LGLQVYHASI SSVKELMIQD VVARVPYGFT SEEAMRTGII 480 KRWHN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 3e-22 | 11 | 212 | 2 | 192 | Transcription factor MYC3 |
4rqw_B | 3e-22 | 11 | 212 | 2 | 192 | Transcription factor MYC3 |
4rs9_A | 3e-22 | 11 | 212 | 2 | 192 | Transcription factor MYC3 |
4yz6_A | 3e-22 | 11 | 212 | 2 | 192 | Transcription factor MYC3 |
5gnj_A | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
5gnj_B | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
5gnj_E | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
5gnj_F | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
5gnj_G | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
5gnj_I | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
5gnj_M | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
5gnj_N | 1e-22 | 309 | 369 | 7 | 72 | Transcription factor MYC2 |
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