PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G074200.1.p
Common NamePRUPE_ppa023256mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 331aa    MW: 36964.1 Da    PI: 10.089
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G074200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.52.1e-31262320360
                         -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                         D y+WrKYGqK++kgs++prsYY+C+s  gCp++k+ver+ edp+++++tYeg+H+h+k
  Prupe.5G074200.1.p 262 DDYTWRKYGQKPIKGSPYPRSYYKCSSVrGCPARKHVERCLEDPTMLVVTYEGDHQHPK 320
                         99************************988****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.2E-16212258IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.804.5E-33248320IPR003657WRKY domain
PROSITE profilePS5081129.746255321IPR003657WRKY domain
SuperFamilySSF1182901.2E-26258320IPR003657WRKY domain
SMARTSM007743.5E-36260320IPR003657WRKY domain
PfamPF031063.6E-26262319IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MNPGLDFKIH EAAQSSLKHA HHLFGCVSEN KQKRSVQEVS LIAQDAVEEF RKLLALLDGS  60
LLSNQKRIRR GPLPKSHDIN QVELLDSPNP SSQNTTHNWP QPHPQPQPQN CFVRQFFSAV  120
HQTDQATANV IHSNSFSMGR EKKPNPALQQ GQSEAGVVLP NNLIMGLNQF SQKPTSTSLI  180
SMDGSSLNTR MIQYSSSELL ASRDCTSMFS SKRKCGAKSE EVTPRCLVSA GGCHCSKRRK  240
LRIKRRIRVP ALSNKLADIP PDDYTWRKYG QKPIKGSPYP RSYYKCSSVR GCPARKHVER  300
CLEDPTMLVV TYEGDHQHPK ITFQAPTLAI *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-22248318271WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241247RIKRRIR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G074200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020418991.10.0probable WRKY transcription factor 15
TrEMBLA0A251P5580.0A0A251P558_PRUPE; Uncharacterized protein
TrEMBLM5WRE00.0M5WRE0_PRUPE; Uncharacterized protein
STRINGEMJ118730.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144241318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-50WRKY DNA-binding protein 21