 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.5G062000.1.p |
Common Name | PRUPE_ppa007892mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
ERF |
Protein Properties |
Length: 353aa MW: 39322.2 Da PI: 6.0988 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G062000.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 199 | 249 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp + + r++lg+f+ta eAaka+++a+ kl+g
Prupe.5G062000.1.p 199 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDRAAFKLRG 249
8********.**********9...4334*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MALSSDMAGL DQVSALERIK NHLLGEFSPA AKSSVTELSD SASSFPQNQW SPEANSDLSR 60 SQSDSLCSKS SSTFDSSIEI SDYLNSNEIF EFEFNSIDFL DFEAKPQVID LITPKSADLR 120 SQNSFEFESK PQIIDDFFEI EHKPQILNRT PPKPAKPTRK PALTVSLPNK TEWIHFASSD 180 PAAKAPVQKS SSNEEKKKHY RGVRQRPWGK YAAEIRDPNR RGSRVWLGTF DTAIEAAKAY 240 DRAAFKLRGS KAILNFPLEA GKAEPVAAVE RKRRREEDRE EVKAVPVPVK KERSTEAPEA 300 VGCIRDMPLT PSSWTAFWDS ESYEDVKGIF SVPPLSPLSP HPAMGYPQLM VV*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:9756931}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2). Wounding as well as cold stress induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by jasmonate, Alternaria brassicicola, exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KM211714 | 0.0 | KM211714.1 Prunus pseudocerasus EREBP-like factor (ERF1) mRNA, complete cds. |
GenBank | KT369539 | 0.0 | KT369539.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 7 mRNA, complete cds. |