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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.5G003600.1.p |
Common Name | PRUPE_ppa026999mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
FAR1 |
Protein Properties |
Length: 764aa MW: 87037.7 Da PI: 6.2206 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.5G003600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 99.4 | 3.7e-31 | 81 | 168 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r++ ++ +++r+r++tr+gCka+++vkk+++g+w v+kl++eHnHel+p
Prupe.5G003600.1.p 81 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQVVCSREGFRRDGGEN--RSKRQRTVTRVGCKAQMTVKKQSSGRWAVSKLVKEHNHELVP 168
9*****************************************9988..999*************************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 764 aa
Download sequence Send
to blast |
MDFEPLNIEN EAVEFDMGGS GDDDATALDL EHPDDSYDIF DDDLVQSSNS TRSRDDLASG 60 DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR 120 RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH 180 VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGGQ 240 FVFDYLKRMQ AEDPGFFFAV QGDFENLTGN IFWADSNSRM NYDYFGDTVT FDTTYRTNRY 300 RVPFAPFTGW NHHGQPVLFG CSLLLNESES SFVWLFQTWL AAMSTRHPVS ITTDQDRIIR 360 AAVGQVFPGT RHRFCKWNVL REAQEKLSDV YHSHPTFEAE FQRCINMTET IDEFESCWES 420 LLQRYDIGDN EWLQSMYDAR QQWVPVFLRD TFFGEMSVTQ GSDNINSYFD GYINASTNIQ 480 VLIKQYEKAI ATRHEKEVKA DYDTMNISPI LRTPSPMEKQ AAKLYTRVVF MKFQEELVET 540 LAYPATMVDD TGSETVYRVA KFGEDHKVYF VRFNVFEKKS SCSCQMFEFS GIICRHILAV 600 FRVTNVLTLP NHYILKRWTK NAKSGVVWDE HTLGLPNDSQ DSSAARYDNL RREAIKYVEE 660 GAESVRVYNV AMDALHEAAS EVTAAKKHGL GVVQSTSINC SQQLQSCTVD QDKKIKELAA 720 ELDIASQQCE AYRAKLLAIL KDMEEQKLKI SVNVRNVRLN LRS*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |