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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.4G279600.1.p |
| Common Name | PRUPE_ppa009438mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 293aa MW: 33718.1 Da PI: 6.5189 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.4G279600.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 167.6 | 4.1e-52 | 9 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelv++yL++k++g++l + +ike+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+
Prupe.4G279600.1.p 9 LPPGFRFHPTDEELVNYYLCRKCAGQPLAV-PIIKEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKH 98
79*************************999.88***************6666689************************************ PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + ++ g+kk Lvfy g+apkg+kt+W+mheyrl
Prupe.4G279600.1.p 99 IGK--PKALGIKKALVFYAGKAPKGVKTNWIMHEYRL 133
*98..778***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MGSGSELELP PGFRFHPTDE ELVNYYLCRK CAGQPLAVPI IKEIDLYKFD PWQLPDMALY 60
GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKHIG KPKALGIKKA LVFYAGKAPK 120
GVKTNWIMHE YRLANVDRSA SKKNNNNLRL DDWVLCRIYN KKGSIEKYNV AMERSKMTKY 180
PEILHEQKPE MTQMPPPHTD MSSMDSAPRV QQTTDYSSCS EHVLSPEVTW EKEVQSELQW 240
SGDELENSFN TLDNQFINYM DGFSDILDSF GAAQPQYQMD QQNMFAYLQT QF*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF198129 | 1e-143 | KF198129.1 Malus hupehensis NAC domain protein (NAC143) mRNA, complete cds. |
| Publications
? help Back to Top |
- Florentin A,Damri M,Grafi G
Stress induces plant somatic cells to acquire some features of stem cells accompanied by selective chromatin reorganization.
Dev. Dyn., 2013. 242(10): p. 1121-33
[PMID:23798027] - Jensen MK, et al.
ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana.
FEBS Open Bio, 2013. 3: p. 321-7
[PMID:23951554] - Wang YX
Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress.
Mol. Biol. Rep., 2013. 40(11): p. 6451-8
[PMID:24057250] - Yang X, et al.
Overexpression of a Miscanthus lutarioriparius NAC gene MlNAC5 confers enhanced drought and cold tolerance in Arabidopsis.
Plant Cell Rep., 2015. 34(6): p. 943-58
[PMID:25666276] - Du Q,Wang H
The role of HD-ZIP III transcription factors and miR165/166 in vascular development and secondary cell wall formation.
Plant Signal Behav, 2015. 10(10): p. e1078955
[PMID:26340415] - Takasaki H, et al.
SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence.
Plant J., 2015. 84(6): p. 1114-23
[PMID:26518251] - Liu Y,Sun J,Wu Y
Arabidopsis ATAF1 enhances the tolerance to salt stress and ABA in transgenic rice.
J. Plant Res., 2016. 129(5): p. 955-962
[PMID:27216423] - Ghandchi FP,Caetano-Anolles G,Clough SJ,Ort DR
Investigating the Control of Chlorophyll Degradation by Genomic Correlation Mining.
PLoS ONE, 2016. 11(9): p. e0162327
[PMID:27618630] - Zhao J,Missihoun TD,Bartels D
The ATAF1 transcription factor is a key regulator of aldehyde dehydrogenase 7B4 (ALDH7B4) gene expression in Arabidopsis thaliana.
Planta, 2018. 248(4): p. 1017-1027
[PMID:30027414]
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