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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G255500.1.p | ||||||||
Common Name | PRUPE_ppa016426mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 123aa MW: 13993.8 Da PI: 8.7284 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.2 | 2.9e-14 | 31 | 120 | 3 | 85 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknra...tksgyW 83 +G++F+P++e l +yL ++++g++ + v++++++y + ePw++ + + + +++++y F++ +kk+++g+r r+ +++g+W Prupe.4G255500.1.p 31 VGYKFRPSEEKLFLHYLLPRLNGEDYPK-GVVPDCNLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLNKKTPNGSRFCRTvgaASTGVW 118 7************************999.99*******9879****7423322..24355688******************633355999* PP NAM 84 ka 85 k Prupe.4G255500.1.p 119 KG 120 95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.15E-16 | 23 | 119 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.39 | 29 | 122 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-6 | 31 | 120 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MSNACRGHVR AVSACRRVRH SSSLKCPYNI VGYKFRPSEE KLFLHYLLPR LNGEDYPKGV 60 VPDCNLYGTK EPWEIWRDFH HSSPDDQEDI YVFTTLNKKT PNGSRFCRTV GAASTGVWKG 120 ED* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G255500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT893414 | 7e-85 | KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds. | |||
GenBank | KT893415 | 7e-85 | KT893415.1 Prunus persica cultivar Jinliuzaohong NAC66 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008226305.2 | 2e-60 | PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 66-like | ||||
TrEMBL | A0A251PR31 | 2e-87 | A0A251PR31_PRUPE; Uncharacterized protein | ||||
STRING | EMJ13606 | 3e-82 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 7e-12 | NAC domain containing protein 47 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G255500.1.p |
Entrez Gene | 18779830 |