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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G246100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 406aa MW: 45283 Da PI: 4.4792 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 80.3 | 4.3e-25 | 10 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 lp+Gf+F+P+d++l+ +yL +kv+g+++ e+vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r+ r++ sg+Wk Prupe.4G246100.1.p 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYENVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGE 100 79*************************99999******99568*****742444222366799**************************99 PP NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++v + k+++ g+ k + + + ++ + W+mhey+l Prupe.4G246100.1.p 101 NSGTTVSDPenKENDLGTWKRFHYE--NPKSVQDGCWIMHEYSL 142 9999999985556668888887776..66667799*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.75E-30 | 7 | 164 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.445 | 10 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.0E-17 | 11 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence Send to blast |
MAPCESAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE 60 YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLGTWK 120 RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE 180 TDTPVQSQNK RQRPQQVTSF EELIGDCTPM SEATGVGGSV SYLPTGLTQS QPDISFAYPT 240 TVVSSQARAN NTDDVSQFHA GGDGDALMSD FLLSDTAQPF TEQALGSYAV CNQERASDVY 300 ETQQGLVLTD NNIGYWPSPF GSEEDQVNAL DFSMDYDLLD HLIDCDDDND GLRQSSTAQF 360 MGMGMENTTT ANQKPCWSSG NKSCFISGGF ILLWSYQKPG PITQE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-13 | 4 | 142 | 9 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 166 | 172 | RGKRKLR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G246100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT893413 | 0.0 | KT893413.1 Prunus persica cultivar Jinliuzaohong NAC68 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007213177.2 | 0.0 | NAC domain-containing protein 74 | ||||
TrEMBL | A0A251PTM4 | 0.0 | A0A251PTM4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ14376 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 1e-18 | NAC domain containing protein 86 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G246100.1.p |