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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.4G154000.1.p |
| Common Name | PRUPE_ppa020506mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 295aa MW: 33821.6 Da PI: 4.3517 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.4G154000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 75.7 | 1.1e-23 | 6 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknra...tksg 81
+p+G+rF P++eel+ +yL ++v+g++ + v++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r+ t +g
Prupe.4G154000.1.p 6 VPVGYRFTPSEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTvgvTGTG 93
599************************999.99*******9879****7423322..24355688******************645588** PP
NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+Wk + k++ + g+++g++k + + + +p+ +W+m e++l
Prupe.4G154000.1.p 94 VWKGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
************9.999***********655555..89*******98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MGGYQVPVGY RFTPSEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTKEPW EIWRDFHHSS 60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGVT GTGVWKGEDS GKKIRACGND IGIRKRFRYM 120
NPGSPHDDRW IMLEFQLDES LVRVRNKETI VLCLVRKKET SGKSKLEERQ NHEVDLPSSG 180
EIQAQYVHDD QQQHIDASTE DQLFLEDYLM NDVEGEHDTM VNPSLLAQYD QQDMIGTSTE 240
DQLRVLEDFL MNDVEGEQDT MVNPALLAQY GQQGTSIEDQ LRLFEDYLMS DIEG*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-17 | 6 | 163 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-17 | 6 | 163 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-17 | 6 | 163 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-17 | 6 | 163 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 8e-17 | 6 | 163 | 20 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 8e-17 | 6 | 163 | 17 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 8e-17 | 6 | 163 | 17 | 170 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KT893414 | 0.0 | KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds. |
